Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1142 ATGACCCTCTCAACCACCTTTACCTTTGTCACTATCATCTTCCTTTTTCTCACACTCACTACCAACCCAGTCCTTTCTCAGTTATTACCTCCATTTGCTTGTGATTGGTCAAACCCATCAACCAGATCCTACCCATTTTGCAACCCAAAACTTCCCATCTTACAAAGAACAAGAGACCTTGTTTCTAGACTAACATTGGATGAGAAACTAGCTCAACTCGTTAACTCAGCACCTCCCATTCCTCGACTAGGTATCCCTGGTTATCAATGGTGGAGTGAAGCACTTCATGGAGTTGGTAATGTTGGTCGTGGTATCTTCTTCAATGGTACTATCTCTTCTGCAACTAGCTTCCCTCAAGTTATTCTTACTGCAGCTAGCTTTGATTCCCATCTCTGGTACCGAATCGGTCAGGCAATTGGAATTGAAGCAAGGGCAATATACAATGGAGGGCAAGCAATGGGGATGACATTTTGGGCACCAAACATAAACATATTTAGGGATCCAAGATGGGGTAGAGGACAAGAAACAGCTGGAGAAGATCCTCTGATGACTTCTAATTACGCTGTTTCCTATGTTAGAGGAATTCAAGGTGATTCCTTTCAAGGTGGTAAATTAAGGGGACACCTTCAAGCTTCTGCATGTTGCAAACATTTCACTGCCTATGATTTGGACAATTGGAAGGGTGTTAATCGCTTTCTATTCGATGCTAAAGTGAGTTTGCAAGATTTAGCAGACACATATCAACCACCATTTCACAGTTGCGTAAAGCAAGGACGAGCTAGTGGGATAATGTGTGCTTATAACCGTGTAAATGGAGTTCCAAGTTGTGCTGATTACAATCTCTTAACTGAAACAGTTAGAAAACAATGGGAATTCCACGGGTATATTGTGTCAGATTGTGGAGCTGTTGGGATCATACATGATGAACAAGGATATGCAAAATCTGCAGAGGATGCTGTAGCAGATGTTCTTCATGCTGGGATGGATTTGGAATGTGGAACTTATTTAACAGACCATGCAAAATCAGCAGTGGAGCAGAAAAAACTACATATATCACAAATTGACCGTGCCCTTCACAATCTATTTTCAATCAGAATGAGGCTAGGTCAATTTGGCGGAAATCCAGCCAAGCTTCCATTTGGCATGATTGGTTCCAACCATGTCTGTTCTGAAAATCACTTGTATCTAGCTCTTGAAGCTGCACGAAACGGCATTGTTCTTTTAAAGAACACTGCTTCACTTCTTCCGCTTCCCAAAACAAGTACTATTTCCTTAGCAGTGATCGGTCCTAATGCCAATGCTTCACCTTTAACACTTCTAGGAAACTATGCTGGTCCTCCTTGTAAATACATTACTATACTCCAAGGGTTTCGGCATTATGTTAAGGACGCTGTTTTTCATCCTGGTTGTGGCGGTGGACCAAAGTGTGCTTCGGCACAAATAGACAAGGCAGTGGACATTGCAAAAAAAGTGGATTATGTGGTTTTGGTTATGGGATTGGATCAAAGTGAAGAAAGGGAAGAGCGTGATCGCGTTCACCTTTACTTGCCAGGCAAGCAACTTGAACTCATTAACAGTGTTGCCAAAGCTTCTAAGCGACCTGTTATTTTGGTGCTTCTTTGTGGTGGCCCGGTAGATATTAGTTCCGCAAAATATAACAATAAAATTGGAGGTATCATTTGGGCTGGTTATCCGGGTGAACTTGGAGGCATTGCACTTGCACAGATTATCTTTGGTGATCACAATCCGGGAGGAAGACTACCAATTACTTGGTACCCAAAAGATTACATCAAAGTGCCAATGACAGACATGAGAATGCGAGCTGATCCCTCAACCGGCTATCCCGGAAGAACATACAGATTTTACAAGGGTCCTACTGTGTATGAATTTGGCCATGGACTAAGCTACACAAAATATTCCTACGAGTTTGTTTCCGTTGCACGCGACAAACTTCATTTCAATCAATCATTCACTCATTTGATGGTTGAGAATTCAGAAACCATACGGTACAAATTAGTTTCAGAGTTGAGTGAAGAAACCTGCAAAAGCATGTCGGTCTCAGTCACAATTGGAGTTAAAAACCACGGAAACGTGGTTGGGAGACATCCTATATTGCTGTTTATGAAACCACGAAAACAGAGAATTGGAAGTCCTGTGAAACAATTGGTTGGTTTTCATAGTTTGTTGTTAGATGCAGGGGAAATAAGCCATGTTGGATTTGAGCTCAGTCCTTGTGAACATCTTAGTCGAGCGAACGAGGCTGGTTTAAAGGTCATAGAAGAAGGGTCTCATTTGTTGCTTGTGGGAGAAGAAAAGTACCTAATAGATATCATTGTTTGA 2340 0.4188 MTLSTTFTFVTIIFLFLTLTTNPVLSQLLPPFACDWSNPSTRSYPFCNPKLPILQRTRDLVSRLTLDEKLAQLVNSAPPIPRLGIPGYQWWSEALHGVGNVGRGIFFNGTISSATSFPQVILTAASFDSHLWYRIGQAIGIEARAIYNGGQAMGMTFWAPNINIFRDPRWGRGQETAGEDPLMTSNYAVSYVRGIQGDSFQGGKLRGHLQASACCKHFTAYDLDNWKGVNRFLFDAKVSLQDLADTYQPPFHSCVKQGRASGIMCAYNRVNGVPSCADYNLLTETVRKQWEFHGYIVSDCGAVGIIHDEQGYAKSAEDAVADVLHAGMDLECGTYLTDHAKSAVEQKKLHISQIDRALHNLFSIRMRLGQFGGNPAKLPFGMIGSNHVCSENHLYLALEAARNGIVLLKNTASLLPLPKTSTISLAVIGPNANASPLTLLGNYAGPPCKYITILQGFRHYVKDAVFHPGCGGGPKCASAQIDKAVDIAKKVDYVVLVMGLDQSEEREERDRVHLYLPGKQLELINSVAKASKRPVILVLLCGGPVDISSAKYNNKIGGIIWAGYPGELGGIALAQIIFGDHNPGGRLPITWYPKDYIKVPMTDMRMRADPSTGYPGRTYRFYKGPTVYEFGHGLSYTKYSYEFVSVARDKLHFNQSFTHLMVENSETIRYKLVSELSEETCKSMSVSVTIGVKNHGNVVGRHPILLFMKPRKQRIGSPVKQLVGFHSLLLDAGEISHVGFELSPCEHLSRANEAGLKVIEEGSHLLLVGEEKYLIDIIV* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1142 779 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 405 639 IPR036881 GO:0004553|GO:0005975
Tpr7g1142 779 SMART Fn3_like_2 702 772 IPR026891 -
Tpr7g1142 779 Pfam Fibronectin type III-like domain 705 770 IPR026891 -
Tpr7g1142 779 SUPERFAMILY (Trans)glycosidases 44 403 IPR017853 -
Tpr7g1142 779 Gene3D - 56 378 IPR036962 GO:0004553|GO:0005975
Tpr7g1142 779 Gene3D Immunoglobulins 664 777 IPR013783 -
Tpr7g1142 779 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 3 778 - -
Tpr7g1142 779 PANTHER SUGAR HYDROLASE-RELATED 3 778 IPR044993 GO:0009044|GO:0045493
Tpr7g1142 779 Pfam Glycosyl hydrolase family 3 C-terminal domain 405 636 IPR002772 GO:0004553|GO:0005975
Tpr7g1142 779 Pfam Glycosyl hydrolase family 3 N terminal domain 110 361 IPR001764 GO:0004553|GO:0005975
Tpr7g1142 779 Gene3D - 391 637 IPR036881 GO:0004553|GO:0005975
Tpr7g1142 779 PRINTS Glycosyl hydrolase family 3 signature 117 136 IPR001764 GO:0004553|GO:0005975
Tpr7g1142 779 PRINTS Glycosyl hydrolase family 3 signature 211 227 IPR001764 GO:0004553|GO:0005975
Tpr7g1142 779 PRINTS Glycosyl hydrolase family 3 signature 285 303 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1142 Tpr-Chr7 11288335 11294438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1142 30 772 Glycoside Hydrolase AT1G78060 65.241 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1142 - - aprc:113867121 1367.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1142 7 11288335 11294438 Tpr7g1142 7 11288335 11294438 ECH