Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1140 ATGAGTGAGGATCTGAAGAAAACCGCCTGTAATGGCCAAGAGAAAATGTTAGCAGTATCACTGTCACAAGAGCAACAGAAAAAGATCATTGAGGTGAGAAAGTTGTTAGGAACATTATCAGATAAAGAATCTGTGTATTGTTCTGATGCATCCATTTCAAGGTATTTGAAATCACAAAATTGGAATGTGAAGAAAGCATCTCAAATGTTGAAACAAAGCCTAAAATGGAGAAAGGAGTACAAACCTGAAGAGATCCGTTGGGACGAGGTTTCTAATGAAGCAGAGACAGGGAAAATATACAGACCAAATTATTTTGACAAGCACGGAAGACCAGTGCTTATAATGAGAACAAATCGCCAGAAGTCGAAAACATTAAAAGAAGAAATTAAGCATTTTGTTTACTGCATGGAGAATGCAATTTTAAATCTTCCACCTCACCAAGAACAGGTGATATGGCTGGTTGATTTCCATGGTTTCAATTTGTCAAATGTATCATTCAAGATGACACGTGAAGTTAGCCATATATTACAAAAATATTATCCTCAGCGCCTCGGATTGGCAATCATGTATGATGCACCTGGGATTTTCCAACCATTCTTCGCGATGGTAAAGGTCCTGCTTGAGCAAGAGAGTTATAATAAGGTAAAGTTTGTTTATTCTAACGACCAAAACACAAAGAAGATTATGGAGGGTTTGTTTGATATGGATCAACTTGAACCTGCATTTGGTGGGACTGATGACACAGAATTTGATATAAATAAGTATGCTAAGAGAATGAGAGAGGAAGATAACAAGATGCACTCCTTATGGACAAAGGCAAACCCTCTATCACCAGTTTCACAGAATGTTCCTTCTGAATCGGTCGGGTTAGAAACAGATTCTAATGCTTCCAACAATGACAAAATATCAAGTTCCTCTATTCCTAACCCTGATAAATATATCTTGGTTAATCGTCAGGACAAAAATGCTGTGGCATTAGCATGA 984 0.375 MSEDLKKTACNGQEKMLAVSLSQEQQKKIIEVRKLLGTLSDKESVYCSDASISRYLKSQNWNVKKASQMLKQSLKWRKEYKPEEIRWDEVSNEAETGKIYRPNYFDKHGRPVLIMRTNRQKSKTLKEEIKHFVYCMENAILNLPPHQEQVIWLVDFHGFNLSNVSFKMTREVSHILQKYYPQRLGLAIMYDAPGIFQPFFAMVKVLLEQESYNKVKFVYSNDQNTKKIMEGLFDMDQLEPAFGGTDDTEFDINKYAKRMREEDNKMHSLWTKANPLSPVSQNVPSESVGLETDSNASNNDKISSSSIPNPDKYILVNRQDKNAVALA* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1140 327 PANTHER GH16843P 1 308 - -
Tpr7g1140 327 CDD SEC14 95 245 IPR001251 -
Tpr7g1140 327 SUPERFAMILY CRAL/TRIO N-terminal domain 20 89 IPR036273 -
Tpr7g1140 327 SMART sec14_4 93 247 IPR001251 -
Tpr7g1140 327 Pfam CRAL/TRIO domain 95 244 IPR001251 -
Tpr7g1140 327 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 87 250 IPR001251 -
Tpr7g1140 327 MobiDBLite consensus disorder prediction 271 305 - -
Tpr7g1140 327 Gene3D - 2 281 IPR036865 -
Tpr7g1140 327 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 1 308 - -
Tpr7g1140 327 SUPERFAMILY CRAL/TRIO domain 87 265 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1140 Tpr-Chr7 11276466 11281090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1140 51 215 Acyl Lipid Metabolism Gene Families AT5G47730 24.324 8.46e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1140 - - cam:105852179 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1140 7 11276466 11281090 Tpr7g1140 7 11276466 11281090 ECH