Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1125 ATGGGTTCGTTTTTCAGTGTGTCGAATAATACCAATTCTGATCGAAGTGACCGGGAAGGAATCTCTTCAAATGAGACATGTAAGAGGCAAAGAATGTCGCCTACCGTTGATGAAGAGAATCCAAGACTATTCCCTAATCTTCCTGATGAGGTATCAATTCAGATTATCGCTAGACTTCCTAGAATTTGTTACTTCAATTTTAGGCTTGTGTCGAGAAAGTGGAAGTCAACTATCATGAGTACGGAACTATATGAAGTAAGAAAAGAATTAGGAACAACGGAAGAGTGGTTATATCTTTTGGTTAAGGTAGGAGAGAATAAGCTTTTGTGGCATGCTGTAGATCCTCGTTCTCGAATATGGCAGAGACTGCCTACTATGCCTAATGTTGTCGATGAAGAAGAATCTAAGAAGGGTTCTTCAAGGCTTTGGATGTGGAACATGGTGGAAGGTATCAGAATTGCTGAAGTTATTAGAAGCTTTCTTGGAAAGAGGGATGCATTTGATGAAATGCCCTTTTGTGGTTGTGCTATTGGAGCTGTTGGTGGGTGTCTCTATGTTCTAGGTGGATTCTCTAAAGCTTCAACTATGAGATGCGTCTGGCGATTTGATCCGATACAAAATACGTGGACCAAGGTCACTTCTATGTCTACGGGTCGGGCATATTGTAAGACAGGAATCTTAAACAACAAGCTTTATGTTGTTGGAGGGGTTAGTCAAGGTCCAGCTGGATTGCTACCTCTTCAATCTGCTGAAGTTTTTGATCCCTCTACAGGTGCGTGGTCAGAAATGCCTAGTATGCCGTTCTCAAGAGCTCAGGTCCTGCCGAGCACTTTCTTGGCCGACATGTTAAAACCAATTGCGACAGGGTTGACATCATACATGGGAAGGTTATGTGTTCCACAAAGTTTGTATTCATGGCCCTTTTTTGTTGATGTCGGGGGAGAAATCTATGATCCTGAAACAAACTCATGGATAGAAATGCCAATTGGAATGGGCGAGGGTTGGCCCGCACGACAAGCAGGTACAAAATTGAGTGTCGTAGTGGATAACGAATTATATGCTTTTGATCCTTCCAATACAATGGACAGCGGAAGGATCAAGGTATATGATCAAGGAGAAGATGTTTGGAAAGTTGTTATTGGAAAAGTCCCTATATATGGTTCTGATGATTCAGAATCTCCTTATCTACTTGCTGGTTTCCATGGAAAACTTCATGTCATCACAAAAGATGCCAATCATAATATTGCTGTTTTGCGAGCGGAGCTACGCCATAATTTGGATTGTTCGCCATCATCACCCTCGTCAACACTGTCACAAAATCCCTTGCCTGAATTTGTGGTCCCGCCGGCCGAAACAGATGCAGTTGTTTGGAAAATAGTTGCAAGTAGGTGTTTGGGACAGGCTGAACTAGTTAGTTGCCAAGTAATTGACATGTAG 1437 0.4238 MGSFFSVSNNTNSDRSDREGISSNETCKRQRMSPTVDEENPRLFPNLPDEVSIQIIARLPRICYFNFRLVSRKWKSTIMSTELYEVRKELGTTEEWLYLLVKVGENKLLWHAVDPRSRIWQRLPTMPNVVDEEESKKGSSRLWMWNMVEGIRIAEVIRSFLGKRDAFDEMPFCGCAIGAVGGCLYVLGGFSKASTMRCVWRFDPIQNTWTKVTSMSTGRAYCKTGILNNKLYVVGGVSQGPAGLLPLQSAEVFDPSTGAWSEMPSMPFSRAQVLPSTFLADMLKPIATGLTSYMGRLCVPQSLYSWPFFVDVGGEIYDPETNSWIEMPIGMGEGWPARQAGTKLSVVVDNELYAFDPSNTMDSGRIKVYDQGEDVWKVVIGKVPIYGSDDSESPYLLAGFHGKLHVITKDANHNIAVLRAELRHNLDCSPSSPSSTLSQNPLPEFVVPPAETDAVVWKIVASRCLGQAELVSCQVIDM* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1125 478 SUPERFAMILY Kelch motif 104 407 IPR015915 GO:0005515
Tpr7g1125 478 SUPERFAMILY F-box domain 41 85 IPR036047 GO:0005515
Tpr7g1125 478 ProSiteProfiles F-box domain profile. 41 87 IPR001810 GO:0005515
Tpr7g1125 478 MobiDBLite consensus disorder prediction 18 36 - -
Tpr7g1125 478 Pfam Kelch motif 219 267 IPR006652 GO:0005515
Tpr7g1125 478 Pfam Kelch motif 171 216 IPR006652 GO:0005515
Tpr7g1125 478 Pfam F-box domain 44 81 IPR001810 GO:0005515
Tpr7g1125 478 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 5 477 - -
Tpr7g1125 478 SMART fbox_2 47 87 IPR001810 GO:0005515
Tpr7g1125 478 MobiDBLite consensus disorder prediction 1 41 - -
Tpr7g1125 478 MobiDBLite consensus disorder prediction 1 17 - -
Tpr7g1125 478 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 5 477 - -
Tpr7g1125 478 SMART kelc_smart 230 280 IPR006652 GO:0005515
Tpr7g1125 478 SMART kelc_smart 183 229 IPR006652 GO:0005515
Tpr7g1125 478 Gene3D - 104 384 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1125 Tpr-Chr7 11039262 11042020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1125 37 265 Miscellaneous Gene Families AT4G33900 24.242 2.19e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1125 - - gmx:100806691 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1125 7 11039262 11042020 Tpr7g1125 7 11039262 11042020 ECH