Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1113 ATGGCCGCTTCTCTCTTGAATCAATCATCTCTATTGGCCTGTTGTTCATGTTCTTCTTCTACTTCTTCTAAATCTCCACAACCACCACCCAAATTCGCACGTTTTCCACCTCGCCCCTTTCATGCCTCCAACACTATCAAATTCTTAGGGTTTCCAACCCCCTTTGCCTCTATCAATCCAACTCCACTCTTTGCTTCAACTACAAATAATGAAACAGAGGAGACTCGGAATGGTGAAGATAAAAAACCTTTACCTAGCTTAGTGGTCCTTATTGAAGCATACAAGAAGGCCTTTCTTAACGGCAATGAAACGACTGCATCTCAGATTGAAGAAAGAATACTATCATTGGCAAATAAAAAGAATAAATTGATTCAGAAAGTATCTAGTCTGTCGGCAGATAAAGTTTCTGGAAAGGAGCAATATCTTCGCTTACAAGCGGATTTTGATAACTTTAGGAAAAAATGTGACAAAGAAAGAATTAGCATCCGATCAGATGCCCAGCAAGAATTTACTAAGAAACTTTTGTTGATGGTGGACAGTTTCGAAAGAGTCAAACAACAGATTGAAGCAGCAACGGAGAAAGAGAAGAAGATTGATGCAAGCTATCAAAGTATTTACAAGCAATTTGTTGAGACTCTGAGGAGCCATCATGTTTCTGTGGTACCAACTGTGGGCAAGCCTTTTAATCCCTTGCTACATGAAGCCATTGCACGTGAGGAGTCTGAAGTGTTCAAAGAAGGGATTATAATTAAAGAAACCCGACGAGGTTTCATGCTGAGAGATAAGGTTGTAAGGCCAGCACTTGTGAAGGTTTCCTTAGGTCCTGGGAATAAGAAATCTTCAGCGGCGCCTGCCAAGCCCTTGGAGCAGCCTTCAACAGCTGCTAGAATTGATGAAAGATAA 903 0.4109 MAASLLNQSSLLACCSCSSSTSSKSPQPPPKFARFPPRPFHASNTIKFLGFPTPFASINPTPLFASTTNNETEETRNGEDKKPLPSLVVLIEAYKKAFLNGNETTASQIEERILSLANKKNKLIQKVSSLSADKVSGKEQYLRLQADFDNFRKKCDKERISIRSDAQQEFTKKLLLMVDSFERVKQQIEAATEKEKKIDASYQSIYKQFVETLRSHHVSVVPTVGKPFNPLLHEAIAREESEVFKEGIIIKETRRGFMLRDKVVRPALVKVSLGPGNKKSSAAPAKPLEQPSTAARIDER* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1113 300 Coils Coil 106 126 - -
Tpr7g1113 300 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 219 273 IPR009012 GO:0006457
Tpr7g1113 300 PANTHER GRPE PROTEIN 1 287 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr7g1113 300 Gene3D Head domain of nucleotide exchange factor GrpE 217 272 IPR009012 GO:0006457
Tpr7g1113 300 Hamap Protein GrpE [grpE]. 68 273 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr7g1113 300 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 122 216 IPR013805 -
Tpr7g1113 300 Gene3D - 100 214 IPR013805 -
Tpr7g1113 300 CDD GrpE 138 271 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr7g1113 300 ProSitePatterns grpE protein signature. 228 271 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr7g1113 300 PANTHER GRPE PROTEIN HOMOLOG 1 287 - -
Tpr7g1113 300 MobiDBLite consensus disorder prediction 275 300 - -
Tpr7g1113 300 PRINTS GrpE protein signature 142 158 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr7g1113 300 PRINTS GrpE protein signature 170 185 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr7g1113 300 PRINTS GrpE protein signature 225 240 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr7g1113 300 PRINTS GrpE protein signature 252 271 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr7g1113 300 Pfam GrpE 111 272 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1113 Tpr-Chr7 10862324 10865366 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1113 K03687 - gmx:100809893 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1113 7 10862324 10865366 Tpr7g1113 7 10862324 10865366 ECH