Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1011 ATGAAGCCCAATACTCAGGCTTTCGCCACAGGCCCGCCGCACGTGACTTGTTTTCACCGCGCAACTGTCTCACGTGCCGCGCTTTCTGAGACTCATCTTCCTCCGCCGAACCAAAAACTCCAACAATTCCGGACCACCAAACGCCGCCGTATAAACCTCTCCCTTAACCGCTCCAGTCGCATAACTGCGGCTGTAAACGATGACGTGACAGAAACTTCAGTTGAGCGCGGCGAGTCTAAAGAATGGTCTCGAGCACGAAGCAACCGGCGAGGGGTTCTGATGGCGCCGTTTCTAGCAGCGGGAGCTTCGTTTCTTCTCTCTGCGACGACGACGAGGGCGGCGGAGGAGGAGAAGGTGACGCCGGTGGAAGTAACGGCTGTGAAACCGGAGGAGGTGAAGAAGATTGAAGAGGAAGTGATAACTTCGAGGATTTATGATGCGACGGCGATAGGTGAACCGTTGGCGATAGGGAAAGAGAAAGGGAAAGTGTGGGAGAAGATGATGAATGCTAGAGTTGTTTATTTGGGAGAAGCTGAACAAGTTCCGGTTCGAGATGATAAGGAATTGGAGCTTGAGATTGTGAAGAATTTGCATAAGCGTTGTGTTGAGATTGATAAGCGTTTATCTTTGGCTATTGAAGCTTTTCCCTCTGATCTTCAAGAACCACTCAATCAGTATATGGATAAAAAGATAAATGGAGAAACCTTAAAGACTTATACGGTGCATTGGCCGCCTGAACGATGGCAGGAGTATGAACCTATTCTTAGTTACTGTCGTGAAAATGGAATTCGTCTTATTGCTTGCGGTACTCCACTGAAGATCTTAAGGACTGTCCAAGCAGAAGGAATTAGTGGGCTAACAAAGGCTGAACGTAAATTATATACACCTCCAGCTGGTTCAGGCTTCATATCAGGCTTTAATTCTATGTCGCGTAGATCTTCAGTTGATAGTACTCCAAATTTGTCATTTCCTTTTGGTCCAAGCTCATATCTATCTGCACAGGCTAGAGTAGTTGACGAGTATACTATGTCCCAGATCATCTTACAGAATATGTCTGATGGAGGGGTAACCGGTATGTTGATAGTTGTAACTGGTGCAAGCCATGTGACATATGGATCTAGAGGAACTGGAGTTCCCGCAAGAATTTCGAGAAAATTACAAAAGAAAAATCAAGTAGTTATATTACTTGACCCAGAACGACAGTTCATTCGCCGTGAGGGAGAAGTTCCCGTTGCTGATTTTTTGTGGTATTCTGCTGCCCGACCCTGTAGCAGAAATTGCTTTGACCGGGTTGAGATTGCTCGGGTTATGAATGCTGCCGGTCAGAGGCGAGATGCCCTCCCACAGGATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCACCAGAGGTATTGCAGAACTTCTTTGATCTAGAGAAGTATCCTTTGCTTTCAGAACTCACTCACCGTTTCCAGGGTTTCAGGGAAAGATTGTTGGCCGATCCCAAATTCTTGCATAGACTTGCCATAGAAGAAGGAATATCAGTAACAACTACATTATTAGCACAGTATCAAAAGCGGAAAGAAAACTTCTTTCAAGAGCTTGACTATGTTATTACGGATACAGTCAGAGGATCAGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCACCGACTTTATCATTCCTTTCCTATGCTGATGACATGAATTCTCCTGATAACATTAGCTCTCTATTAGGACTTCTTGGCTCCATCCCAGACAATGCATTTCAAAAAAATCCAGTGGGGACAAATTGGAATCTCAATCATCGAATTGCATCAGTTGTATTTGGTGGTCTAAAACTCGCTGGTGTTGGATTTATTTCAAGTATTGGAGCTGTGGCTTCATCAAATTCACTGTTTGCAGTTCGTAAATTCCTTAATCCAGCAATCGTCGCTAACCAACAGATTGCAAGGTCACCAATACTCAAAACAGCAGTTGTTTATGCATGTTTTCTTGGAATATCAGCAAATCTCCGTTATCAGATAATTGCTGGGGTAGTAGAGCATCGGATTTCTGATCAGTTTGCTTCCCAAACATTTCTTGTAAATATGCTATCTTTTGTATCACGGACAATCAATTCTTATTGGGGAACGCAGCAATGGATTGACCTCGCACTCTCGACCGGATTGCAAGTTAGAAAGACCGAGTTACCTGAGTTACCTACATCAGATTCTCCAAATAGAAAGATCGAGTTACCTGAGTTACCTACATCAGATTCTCCAAATCAAGCTGTAATCTTATGCAATGAAACAGAAGAAGCCAACATCGATGAGATTAAAAGTGAATGA 2310 0.4385 MKPNTQAFATGPPHVTCFHRATVSRAALSETHLPPPNQKLQQFRTTKRRRINLSLNRSSRITAAVNDDVTETSVERGESKEWSRARSNRRGVLMAPFLAAGASFLLSATTTRAAEEEKVTPVEVTAVKPEEVKKIEEEVITSRIYDATAIGEPLAIGKEKGKVWEKMMNARVVYLGEAEQVPVRDDKELELEIVKNLHKRCVEIDKRLSLAIEAFPSDLQEPLNQYMDKKINGETLKTYTVHWPPERWQEYEPILSYCRENGIRLIACGTPLKILRTVQAEGISGLTKAERKLYTPPAGSGFISGFNSMSRRSSVDSTPNLSFPFGPSSYLSAQARVVDEYTMSQIILQNMSDGGVTGMLIVVTGASHVTYGSRGTGVPARISRKLQKKNQVVILLDPERQFIRREGEVPVADFLWYSAARPCSRNCFDRVEIARVMNAAGQRRDALPQDLQKGIDLGLVSPEVLQNFFDLEKYPLLSELTHRFQGFRERLLADPKFLHRLAIEEGISVTTTLLAQYQKRKENFFQELDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADDMNSPDNISSLLGLLGSIPDNAFQKNPVGTNWNLNHRIASVVFGGLKLAGVGFISSIGAVASSNSLFAVRKFLNPAIVANQQIARSPILKTAVVYACFLGISANLRYQIIAGVVEHRISDQFASQTFLVNMLSFVSRTINSYWGTQQWIDLALSTGLQVRKTELPELPTSDSPNRKIELPELPTSDSPNQAVILCNETEEANIDEIKSE* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1011 769 MobiDBLite consensus disorder prediction 724 744 - -
Tpr7g1011 769 PANTHER PROTEIN RETICULATA-RELATED 5, CHLOROPLASTIC 44 768 - -
Tpr7g1011 769 SUPERFAMILY EreA/ChaN-like 162 418 - -
Tpr7g1011 769 Pfam Protein RETICULATA-related 489 673 IPR021825 -
Tpr7g1011 769 Gene3D - 141 315 - -
Tpr7g1011 769 CDD ChanN-like 171 395 IPR007314 -
Tpr7g1011 769 Pfam Haem-binding uptake, Tiki superfamily, ChaN 163 382 IPR007314 -
Tpr7g1011 769 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 44 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1011 Tpr-Chr7 9529783 9535685 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1011 - - mtr:MTR_3g071970 1303.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1011 7 9529783 9535685 Tpr7g1011 7 9529783 9535685 ECH