Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0978 ATGGCGAACGTTGAAGAACTCATATCTTCTATATTCTCAGATATCAACACTTACACCGGAAAAGACCCTCTTCTTCCTTGGCTCCGAGGAATCCGAAAGATTAAGGACAATCTTCCCTCAAAAACCCTCAAGGAAAAATTACCCGACTTCTTGCGGAAATGCACCCAAACATTTGAGCTGGATCGACGTTACAAAAACGATATGCGTTATCTTCGTGTTTGGCTCCACTTGATGGATTTTGTGGATGATCCAAGTGCATTGCTGAGAACTATGGAGGTTAATCAAATCGGAACAAAACGATGTCAATTCTATCAAGCATATGCTCTTTACTATGAGAAGAGTAAGAATTATGATGAAGCTGAGAAAATGTATCATATGGGAGTTAAGAACCTTGCAGAACCTGTCGATGAGTTGCAGAAATCTTATGAACAATTTCTTCAACGCATGAAACGCAAGAAAAAAATTCAGGAAATGAAAGCTGCTGATAGACGCGTAAAGGCTAAGAATGATGACAACAAGAGATTTCGAGGTGATCATACAGTTGTAATCAACAAGTTTGTTGACACTGCCATGGATGGAAAGTCAGAAGCAGAAAATGCATGCCATCATGGACTAGTTGATCCTACGATAAATATGAAGGAGGCCATGAATGCCATTAACAGCATGTTTAGTGAGCCATTAGAGACTGTTCCTTTGGCTAGGAAATCGCATAAAAACAATTCGAAAGAAAGTCTCAGTACACAGAACAACTTTGAAGTTTTTGTTGATGAAAACTTGGACAATGAAATTAAACCAAGTGGTTCCTTATCGCTTCAGCAAAGGACTGAAGCTAGAAAACCTCAACAAGAGTCACTCCAGATATATATTGATGATGAAGGATGTTCCGAAGGTTCTACTTCATCAGCTCCAAAAACAAATGGCTTTGTTTTTCCCCGACCTAAGGATGTTTGTTCTGAGAAATCCAGGGATATGGATGCACAAAGGTGTGGTAATTCAAAGTTCAGAGAGGATACAGTTGTTCGCAGATTTGTTGGTTCTGCCATTTTGGATGAACCAAAGGTGGAGAATGCTTGTCACCACGGCTTAGTAGACCCCACAATCAACATGAAGGAAGCAATGAATGACATAAATAGCATGTTTGGGAAGCCAATAGATTTTGTTAGGAAAAAAAGATCAGTGAAGCAGGAGAAAGCACCGGAGAACAATAGCGGAAAGGACTTTGGTGGTGGGTTTTCAATCCTTGCTGATGATGATGACGACGACCTTCAACAGAAACAACGTCCTCCACTACCAAAACCGCTAGCAAAGTCGAAGGGATCAGATTTATTTGAGCCAACTCTCCACACAAAAGAAGCCATGGATGACATTAACAAGATGTTTAATATGCCTTTGGATTTTTAG 1401 0.4011 MANVEELISSIFSDINTYTGKDPLLPWLRGIRKIKDNLPSKTLKEKLPDFLRKCTQTFELDRRYKNDMRYLRVWLHLMDFVDDPSALLRTMEVNQIGTKRCQFYQAYALYYEKSKNYDEAEKMYHMGVKNLAEPVDELQKSYEQFLQRMKRKKKIQEMKAADRRVKAKNDDNKRFRGDHTVVINKFVDTAMDGKSEAENACHHGLVDPTINMKEAMNAINSMFSEPLETVPLARKSHKNNSKESLSTQNNFEVFVDENLDNEIKPSGSLSLQQRTEARKPQQESLQIYIDDEGCSEGSTSSAPKTNGFVFPRPKDVCSEKSRDMDAQRCGNSKFREDTVVRRFVGSAILDEPKVENACHHGLVDPTINMKEAMNDINSMFGKPIDFVRKKRSVKQEKAPENNSGKDFGGGFSILADDDDDDLQQKQRPPLPKPLAKSKGSDLFEPTLHTKEAMDDINKMFNMPLDF* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0978 466 MobiDBLite consensus disorder prediction 390 448 - -
Tpr7g0978 466 PANTHER OS11G0128700 PROTEIN 4 162 - -
Tpr7g0978 466 PANTHER OS11G0128700 PROTEIN 159 466 - -
Tpr7g0978 466 Pfam Mad3/BUB1 homology region 1 13 128 IPR013212 -
Tpr7g0978 466 SMART mad3_bub1_i 4 128 IPR013212 -
Tpr7g0978 466 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 159 466 IPR015661 GO:0007094
Tpr7g0978 466 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 4 162 IPR015661 GO:0007094
Tpr7g0978 466 Gene3D - 10 167 - -
Tpr7g0978 466 ProSiteProfiles BUB1 N-terminal domain profile. 11 170 IPR013212 -
Tpr7g0978 466 Coils Coil 135 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0978 Tpr-Chr7 9056843 9059744 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0978 - - mtr:MTR_3g071460 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0978 7 9056843 9059744 Tpr7g0978 7 9056843 9059744 ECH