Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0939 ATGAGGATGACAGTGGAACCAAGCTACTCTCCAACTCCAACTCCCAAAGAAGAACTCGAATGGCTTCCACTTCCAAAACACCCTCTCTTCACCACCACAACCACCACCACCGCCACCACCACCACTACTTCCAGCAACGTTACCCGAAACCTACTTGCTTTTGACGAAATTAACAACCGTCTCTATTTCTGGGACTCCAACAATAACCGCCTCCATCGTCTTTCTCTTCGCCTCGGTGATCCCGGTCCTACTTCCGTTCTCGCCGCTTCTCCTTCTAAGGTTTTGCAAACGGATGTTGTGCTGGATTTTGATGTGAATAAAATCTCTATCAATAGGAATGGAACAGCGATACTCCTTTTTGGTTCTCAAAGACTCTGTGTTATGTATCTCTATGGACGCACTTCCAAGAAGGATGTAAATTTGATTTGTAGGACTATTACTGTTGGTTCTCAAACACATTCCATTGGAAACAATGATATTCCTGTATTGGAAGCCTTATGGCACCCTTACAGTGATACCCATTTGGGAGTTCTTTCTTCTGACTCAGTTTTTAGGCTTTTCAATCTGGCTCTGGATCCTTTGCAACCAGAGCAAGAATATTATTTACAGGCTGCAGGGTCTGGTAGATCCAAAAATGCATCATCAATGTGTCCAGTCGGGTTTTCTTTTGGGGGAGACCACTTGTGGGACAGGTTTAGTGTTTTTGTTGCATTCAGTGATGGGTCTATCTATGTAATTTGTCCTGTTGTTCCATTTGGAAGTCTCTTCATATGTGAATCGTTATTAGAAATATACAACGATGCTCATACATTTGGGCTAATGTCAGCCAACTCTGTAGCGGCTAGTAATTCAAAGTTGGCAATCTCCTGGCTAGAAGCAACATTTCCTGAGTTACAGAAGCAAGAAATTGAAGGAGACAGCCTGTCTTTGCTTAGAGCTCACGCTTATGCTGTATTTGACGCATCTCTTGTCTTGCAGGGACCTCTGCGAAGAGTAGGTCAGAGTGGAAATGAAGATTCAGTTGGTCGTAGTGCTGAATGTGAGGGCCGTGCAGTTAGTTTTCTCTACAATTCAGTCAGCAAAGACTCTATCTTGGTGACTGCCTGGAGTGGTGGGCAATTGCAGATAGATGCTCTAGCTGATGAAATCCAACCTGTTTGGAGTGTTGGTAGTCCACCCCGTCTTCGTCTTGATTCCCACGACAAAATTCTTGGCCTTGCTATGATTTGTGAGTCAATTGCAAGCAGCCGTCTAGAGAAGCTTGATCATAATGCCTGGTTGGGTAATCCACCCCCTCTGCTGAGACTGGCTATTGTTGATTTGGCTCTGCCACGAAGAGCAGAAAGCGGTTATAATATTTCATTGTTCATTGATACACTTATGCCAGAGAGAATATATTCCCTCCACGATGGAGGGATCGACTCAATATTGTTGCATTTTCTTCCATTTACAAGTCAGACAAATGGAAAGGATGATACAATGAGAACACCTTCTGTGCATCCTGTTCTAAATACTTGCCAGAGTGGACGCACTGCAGAGCCTTCACTTTGTGGTTTCGTGTCATTGTCTGATTCATTTGGATATTCCTGGATTGTAGCTGTTACTCTTTCTCAAGAATGTGTTGTGCTTGAGATGAAAACTTGGAACCTCTTGCTTCCGTTAAGCATTGATATGGAGAAGGAACGCATTCAATCAGCGGGGCAATTAAATGATAGAGAGATACAACCAATAATTAGCAAAGAACTGCTTAGTGGGCCCAAGGAAGTACTTGTGCCTTGGGCCTCTCAAAGTTTACGTTCAGTTGCAGCTGATTCAATTGAAGGCCGATCAACATTGCATCAGTATTTCAAGTTATTTCATGAAACTTACGTGGAATATGCACATAAGGTGCACCTGGAACTCAAGCATCACGCACCTCAGTTGAAGAAAATCATTAATGACCAACATACTCGATTAGGTGAAGCACGGCAGAAACTTTTGAAAGTTGAGGAGAAAGAGTCTATATTACAGAAAAGAATTGATCGTGCAATTCAAATGCACAGTTCTTTGGAAGAACGCTTACAACAATTAAGGAAATTACCTGGTGCTCACAAAAAACCACTATCCAGAGCAGAACGACAGTTTAAGTCTGAACTTGACCAATTCAAGGAAGTTGAGTTGGATGCCTTGCATTCTTCTGTTGAGGCGGTAAGTGCAAGGATGAGAAGGCACATGCAAGCTTCAAAAGCTAGTCAACAACAAAAGAAAATACCAGGGAAGAAAATTAGTGCTGGAGATGATCAGATATCAATACTCAAATCATCGCTTGAAAAACTTTCACTTGTAAATACTGAAAATTCAAAGAAAGTTAAGCTTGTTGAGTCTACGTTGAGCAACAAAGAAAAAATTGGCGGGGAATCAAGTCTGCCTATGCTTAAAAACTGTTAG 2427 0.4236 MRMTVEPSYSPTPTPKEELEWLPLPKHPLFTTTTTTTATTTTTSSNVTRNLLAFDEINNRLYFWDSNNNRLHRLSLRLGDPGPTSVLAASPSKVLQTDVVLDFDVNKISINRNGTAILLFGSQRLCVMYLYGRTSKKDVNLICRTITVGSQTHSIGNNDIPVLEALWHPYSDTHLGVLSSDSVFRLFNLALDPLQPEQEYYLQAAGSGRSKNASSMCPVGFSFGGDHLWDRFSVFVAFSDGSIYVICPVVPFGSLFICESLLEIYNDAHTFGLMSANSVAASNSKLAISWLEATFPELQKQEIEGDSLSLLRAHAYAVFDASLVLQGPLRRVGQSGNEDSVGRSAECEGRAVSFLYNSVSKDSILVTAWSGGQLQIDALADEIQPVWSVGSPPRLRLDSHDKILGLAMICESIASSRLEKLDHNAWLGNPPPLLRLAIVDLALPRRAESGYNISLFIDTLMPERIYSLHDGGIDSILLHFLPFTSQTNGKDDTMRTPSVHPVLNTCQSGRTAEPSLCGFVSLSDSFGYSWIVAVTLSQECVVLEMKTWNLLLPLSIDMEKERIQSAGQLNDREIQPIISKELLSGPKEVLVPWASQSLRSVAADSIEGRSTLHQYFKLFHETYVEYAHKVHLELKHHAPQLKKIINDQHTRLGEARQKLLKVEEKESILQKRIDRAIQMHSSLEERLQQLRKLPGAHKKPLSRAERQFKSELDQFKEVELDALHSSVEAVSARMRRHMQASKASQQQKKIPGKKISAGDDQISILKSSLEKLSLVNTENSKKVKLVESTLSNKEKIGGESSLPMLKNC* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0939 808 SUPERFAMILY WD40 repeat-like 48 246 IPR036322 GO:0005515
Tpr7g0939 808 Coils Coil 701 721 - -
Tpr7g0939 808 PANTHER NUCLEOPORIN NUP84-RELATED 12 794 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Tpr7g0939 808 Coils Coil 673 693 - -
Tpr7g0939 808 Pfam Nuclear pore component 23 213 IPR019321 -
Tpr7g0939 808 Pfam Nuclear pore component 452 787 IPR019321 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0939 K14318 - gmx:100801853 1303.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0939 7 8605966 8612535 Tpr7g0939 7 8605966 8612535 ECH