Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0880 ATGGAACAAGAAAAAGAGAAGAGAGAAGAAAGTGAACAAGAGAAATGGGTTTATGATGGTTCTGTGGATTCTAAAGGTAGAGTTCCTCTTCGTGCTTCAACTGGTGTATGGATAGCTTCTCTCTTTGTCCTCACAATTGAATTTAGTGAAAGAGTAAGTTACTTTGGGATAGCTGCAAATCTGATCTCATACCTTACTAAGGTGATGAATGAAGACCTTAAAACTGCAGCAAAAAATGTAAACTGTTGGGCAGGAACAACAACCTTGATGCCTCTAATTGGTGGATTTCTAGCTGATGCTTACATTGGTCGGTTTCCTATGGTCCTATTTTCTTCCCTCGTCTACCTCATGGGGTTAAGCCTACTGACTATGTCTCAATACATTCCTAGTTTAAAACCATGCAACACAAAGACATGTTCTCAACCAAGAAAACTTCATCAAGTAGTTTTCTTCCTTGCCCTTTACTGTATATCCTTGGGGACTGGAGGACACAAACCATGTTTGGAAAGCTTTGGAGCTGATCAATTCGATGAAGAACACGCCAAAGAAAGAAAAAAGAAAATGTCTTTCTTCAACTGGTGGAACTTTGCACTGTGTATTGCATTGCTGCTTGGTGCAACAGTGATTGTTTATGTTCAAGATGTTGTTAGCTGGGGAGCTGCTAGTCTTATTCTCACAATTCTTATGGCTTTATGCATCATAGCTTTTTATGTTGGGAAGTCATTTTATAGGTATAGAAGGCCAGAAGGAAATACTTTAAAACCAATTTTACAGGTACTAATTGCAGCTATAAGGAAAAGGAAGTTATCTTGTCCCTCAAATCCTGCTTTATTGTATGAAGTTCCAATGTCAGATAAGTCCCAAGGAAGGCTTCTATGCAATACTAGCCAGCTAAGGTTTCTTGACAAAGCTGCAATAATTGAAGACATACATGTTGGTCAAAAAGACAATCCATGGAGGTTAGCAACGGTGACAAGAGTGGAAGAAACAAAGCTTATTCTGAACATAATTCCCATATGGCTAACATCATTAACAACAGGAATATGTGTTGCACAAGGCTCCACACTCTTTGTAAAACAAGCTGCTGCTATGAACTTGAAGCTAAGTAACAGTTTCACTATCCCAGCAGCTTCTATTTCTTCTGCAGCAGCTATTGGAACCTTAATATCAGTTCCCATATATGACAAGATTATTGTTCCAAATATGAGAAGAATCACTGGTAATGAAAGAGGAATCAGCATACTAAGAAGAATTTCAATTGGCTTAGCATTTTCCGTCGTAGTTATGATTGTTGCAGCCTTAGTAGAAGCTAAGAGACTTAGAATGCATGAGCAAGAAATCCTGAGAGCAGGGGAAACAGACCAAAAGACAATGAGTGTGTTTTGGTTAATACCTCAATACTTGATACTTGGTTTTGGTGATTCATTTTCTCTTGTTGGTTTACAAGAGTATTTCTATGACCAAGTTCCTGATTCAATGAGAAGTTTAGGAATGGCTTTATATCTTAGTGTGATTGGAGTTGGAAGTTTCTTAAGTAGTTTTTTAATCACTATTGTGGATCATGTGACAGAAAAGAATGGTAAAAGTTGGATTGGGAAGGATATAAATTCAAGTCGTTTGGATAGGTTTTATTGGATGTTGGCTGATGTAGGAGGATTTCTTCAGTATTTTATTATTTTAGTTAGATTTAGTTTTATTATATTTTAG 1707 0.3714 MEQEKEKREESEQEKWVYDGSVDSKGRVPLRASTGVWIASLFVLTIEFSERVSYFGIAANLISYLTKVMNEDLKTAAKNVNCWAGTTTLMPLIGGFLADAYIGRFPMVLFSSLVYLMGLSLLTMSQYIPSLKPCNTKTCSQPRKLHQVVFFLALYCISLGTGGHKPCLESFGADQFDEEHAKERKKKMSFFNWWNFALCIALLLGATVIVYVQDVVSWGAASLILTILMALCIIAFYVGKSFYRYRRPEGNTLKPILQVLIAAIRKRKLSCPSNPALLYEVPMSDKSQGRLLCNTSQLRFLDKAAIIEDIHVGQKDNPWRLATVTRVEETKLILNIIPIWLTSLTTGICVAQGSTLFVKQAAAMNLKLSNSFTIPAASISSAAAIGTLISVPIYDKIIVPNMRRITGNERGISILRRISIGLAFSVVVMIVAALVEAKRLRMHEQEILRAGETDQKTMSVFWLIPQYLILGFGDSFSLVGLQEYFYDQVPDSMRSLGMALYLSVIGVGSFLSSFLITIVDHVTEKNGKSWIGKDINSSRLDRFYWMLADVGGFLQYFIILVRFSFIIF* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0880 568 Pfam POT family 107 528 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr7g0880 568 SUPERFAMILY MFS general substrate transporter 34 522 IPR036259 -
Tpr7g0880 568 PANTHER OS03G0204700 PROTEIN 22 563 - -
Tpr7g0880 568 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 22 563 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr7g0880 568 Gene3D MFS general substrate transporter like domains 8 565 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0880 Tpr-Chr7 7763095 7766534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0880 1 565 Organic Solute Cotransporters AT3G53960 54.688 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0880 - - gmx:102660397 860.136