Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0875 ATGTCTTCACAAATGAAGAAAAAAACATCAATCCACCACAACTCTCCCAAAACTCCTTACAACACCAATCATGAATATGATGATACAACAGACCATTCTCTACATACTCAACTTTGTAACAACCCATGTTGTTTCTTCTGCATAATGAAAGAACAAAATCCATCTCTAAGAAGATCAAAAATATCAACATGCTTCAAAGAAATGCCTCAAAGAGACAATCAAGAACATGTCTTAGTCCTCAGTGGACTATGGAACATAGCCATGACTCAACCCAACAATCCAGAGTTTCCTTCTCTTGGTATATTCAACTGCTTGGCAAATCTAATAACCAAAGGTACAAAAAACAAAACTTGGCTTCACACAAATCAAAATATATACATACCTTATTATGCTGCTCATATTATTGGCTCTTATACAATGAACAAAGAAGAGTTTGCACAAATAGCCGTTAAATCGGGTGTTATACCACCATTGTTAGAACTTCTGAGAGGTAAAATAAGTTGGGTTGAACAAAGAGTTGCTGTTAGAGCACTTGGTCATTTAGCTAGTTACAATAGTACTTATGAATCAGTGGTAGAGTATGAAACAGAGTTGGTGAAATTAACAATGAATTTAGCTTCAACTTGCTTAGAAAAAATCTATGTTGAATTTATATCAGTTAAGAGAAGAGTTGAGTATCATAGAAACTTGCTTACCAGAGGTTTAGGTGATTTAGAGATGGAGAATCGAAAAGCCGAAGAATGGACTAGTCAACTTCAATGTTGGTCTATTTATCTTCTTAACTGTTTTGCTTGTAAAGATTATAATAACTCTTTGAATCTCATTTGCAAAAAAGTGTTTTTGAATGATTTGTGTGATATGTGGGGTGGATTGATGAATCACACTTCACCATGTGGGTTTGGACTCATTAGAATCATTTGTTACAATAATATTGGAAGGAAAAAAATTGCTAAGTTACCAAAAGTTGTGGAAACTCTTTGTAACCTCTCAAGATCATGTGATGATTGGCAATATCTTGGTATAGATTGTCTTTTATTGCTTCTCAAGGATCAAAATACAAGGTACAAAGTTATTAATATTGATAATGTTGATGTTGTTTCATGTCTTGTTGATTTGATTGAACTTAGAAGCCTTGGAGATAAATCAAATGTTGGTGACACAATCACAAAGGTGCTAGTGTCACTTCTTGAAGATAATGACAATGATTGTAAATTGAAATTCTCGACGAATCTTATTTCGTTGAATTTGAAGTTGGTTAGGAGGAATAAGGAGAAACTAATGTCAGAGGTAAAATTGGAAGAAAAAATGGTTACTGCGAAATTATTTAAGCAAGAAGCTAATCATATGTTTAGTTTGGGAAGAGTAGAAGAAGCTTTATTGAAATATTGTGAAGCACTTGATATTTGTCCATTGAAGTTTAGAAATGAAAGAATGGTGATTTATAGTAACAAAGCTCAGTGTAATCTTTTGCTTAAAAAAACTGATTTAGCTATAAGTGATTCTACACGTGCTCTTTGTCTCTCTAATCCAACAAATTCACATGGTAAAAGTCTTTGGAGAAGGTCACAAGCTTATGATATGAAAGGAATGGCAAAAGAGAGTCTTATGGATTGTATAATGTTTATGAATGGTTTTGTTAAGTCAAATGAGAATAAGAATGTTAAGGTTTCATATCATGTTGCTAGAATGTTCTGCAAACAAATGGATGCCACGTGGCTATTTGGTACTGCTTGTTCAAAGTCAAAGGTGATACACAACGTTAATGTTCCACTTGTGGAAAACACTTGTGAGATTGAAAGGGAGCATGAGATTGAGAATGAGGGTAACTATGAAGACCAACCTTGTGATCAAAAGACAAGTTTCATGCCAGGTTTGTCTACCATTATTGAAGAACCTTTTCACGCTAAAGAATCTAGTAGAAGAAAGATGGAAAGAGCAAGAAGGAGATTAAAGAAAGCTGTTGTAGATTAA 1971 0.3374 MSSQMKKKTSIHHNSPKTPYNTNHEYDDTTDHSLHTQLCNNPCCFFCIMKEQNPSLRRSKISTCFKEMPQRDNQEHVLVLSGLWNIAMTQPNNPEFPSLGIFNCLANLITKGTKNKTWLHTNQNIYIPYYAAHIIGSYTMNKEEFAQIAVKSGVIPPLLELLRGKISWVEQRVAVRALGHLASYNSTYESVVEYETELVKLTMNLASTCLEKIYVEFISVKRRVEYHRNLLTRGLGDLEMENRKAEEWTSQLQCWSIYLLNCFACKDYNNSLNLICKKVFLNDLCDMWGGLMNHTSPCGFGLIRIICYNNIGRKKIAKLPKVVETLCNLSRSCDDWQYLGIDCLLLLLKDQNTRYKVINIDNVDVVSCLVDLIELRSLGDKSNVGDTITKVLVSLLEDNDNDCKLKFSTNLISLNLKLVRRNKEKLMSEVKLEEKMVTAKLFKQEANHMFSLGRVEEALLKYCEALDICPLKFRNERMVIYSNKAQCNLLLKKTDLAISDSTRALCLSNPTNSHGKSLWRRSQAYDMKGMAKESLMDCIMFMNGFVKSNENKNVKVSYHVARMFCKQMDATWLFGTACSKSKVIHNVNVPLVENTCEIEREHEIENEGNYEDQPCDQKTSFMPGLSTIIEEPFHAKESSRRKMERARRRLKKAVVD* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0875 656 Gene3D Tetratricopeptide repeat domain 438 555 IPR011990 GO:0005515
Tpr7g0875 656 SUPERFAMILY TPR-like 433 539 IPR011990 GO:0005515
Tpr7g0875 656 Coils Coil 636 656 - -
Tpr7g0875 656 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 23 648 - -
Tpr7g0875 656 MobiDBLite consensus disorder prediction 1 21 - -
Tpr7g0875 656 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 23 648 - -
Tpr7g0875 656 Coils Coil 416 436 - -
Tpr7g0875 656 SUPERFAMILY ARM repeat 79 403 IPR016024 -
Tpr7g0875 656 SMART arm_5 142 183 IPR000225 GO:0005515
Tpr7g0875 656 Gene3D - 52 437 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0875 Tpr-Chr7 7714987 7717615 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0875 - - gmx:100777591 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0875 7 7714987 7717615 Tpr7g0875 7 7714987 7717615 ECH