Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0865 ATGGACCCATCTATAGTGAAGCTTCTTGAAGATGATGAGGACGAAACTATGCATTCAGGGGCAGATGTGGAAGCGTTCCAAGCTGCATTGAATAGAGACATAGGTGGAGATGCTTCTAATTCTCAGCTTTCTGATTCAGATGCAGGAAGCAATAATTCATTCAGTCAATCATTATCAACTTGGCCAACTTCTAGCCATGACAACCAGATTGACTGTCAAAATCAGGAGCCTAAAATTGCACAGCTGCAAGAGCAACCTTCCTCTGAAATGGTGCTGAAGCAAGAAGGACCTATCGTGGAACAGATACGGAATGTTGCCTCACAGGATGCAAGTAATCTTACTTTATCACACAAAAAATCTCAAGATGAATTTCTCCAACGCCAGACTGTACCAGTTTCCCACCAACATCCTCAAACAAATGAAGTTCTGAAATCTGAAAAAGATCCTATCTTCAACCATGAGGCAATCAAAACAAGTAATCCCAACTGTGAATCTCAGTATGCAAAGCTACAGCAGATGAGTAATCAACAGGCCACGGTCAATGAACAACCTAGTAGCCAAGTCAATCGTAGTAAACAGGTACCGTTTGGCTTGTTGCTCCCTATTTTGATTCCCCAACTTGCCAAAGACAGAGCCATGCAACTTCAAACTTTATTTAACAAATTGAAGAGAGATGAAATACCTAAAGATAATTTTGTACGGCTTATGAAAGGGATCGTGGGGGATCAGATGCTTAGAATAGCATTAACAAAAGTGCAACAACAGACAAAAGCCAACACAGGTTCTTCTGGACAGCAGCACCCTGTAAGGATGCCAAGTGTTACTTCCAGTGGAACAAAGTTTAACGATCCCCATGCATTAGCACAACTGCATCAGAGAAGTATGAGTGCTGCTCCAGACCATTCTCATAATACTTCTTCGGGTATCCAAGTGAAGAGTGAGCCTACCTATTCGACTATGGACATTAGTGCTAAAAAACCTCAGGAACACGATGTTCGAGTAGTGCAACCAACTCAATTACCATCATCCAGTTCTAATGCCGTTAGTCAAGAAACTGAAAGATCCTCAGTTCACATACAAGGCCTTAATAAGCAGCAACAACAGCATATACATTTCCCATCGACATATGGAAGCAGTGGTGGTAACTATATCCCTTTTTCTGGAACAACCACTGGTTCATCACCATCTCTCAGACCACAACCTCATCCTCATGATTCGCACATGAGGCAAATTCCACATCAGAACATTGGTCTAAGTCACTTAGGTGTAGAACGGCAGAGTTCTTTCAATGATCCTAAGAGAATGCCAGGTGGATCTGTGCCGACTGTGGTAAACAATACATCATCACAACAAAATTCAAATTCTTGGCAACCATCAGCAGAACAAAATCCAGGCTTGTTTACATCTATGTCATATGTAAAAAAGGAACCTAATGATCTTTCCATTGATCAGCAACACAGGCATCATTTGTCGAAATTGCATGGGTTGCCTTCTGTTAATTCTGGTCAAAATGAACAGGGTAGCGGTATCAATCAAGGCCCTGTAAAGGATGAGTTTTCAAGAGGTTCTGTAGTATCAACTAGCATGCCGCATACAACATCTGCTAGCTTGCCGCCAAATTCTGCTGCCCCTTCTGCATCTCAACTAGATCCAACTGTCTCTTTAAGCTCTCAGATCCCAGCTAGCACTTCTGGTATTAATGCAAAGGCACCTCTAAAAAAAACTCCTCTTGGCCAGAAGAAACCACTTGAAGCACTTGGTTCTTCACCTCCCCCTCCAAGTAAGAAACAAAAGGTGTCTGGCTCATCTCTGGAACAAAGCATTGAACAGCTTAATGATGTTGCTGCTGTTAGTGGTGTTGATCTTAGGGAAGAGGAAGAACAGTTATTTTCTGGGTCCAAGGAGGACAGTCGAGCTTCAGAAGCATCTCGAAGAGTTGTGCAAGAAGAGGAGGAAAGTCTGATTTTGCTGAAAGCTCCATTGCAGAGAAAGTTGATTGAGATTATGACCGAGTATGGCTTGAAAGGCATGAGTAATGATGTAGAAAAATGCTTGTCACTGTGTGTGGAAGAGAGAATGCGTGGAGTAATAAGTAACATAATTAGAATGTCAAAACAGCGGGTTGATATTGAGAAAACAAGACATCGGACTGTTGTCACGTCAGATGTTCGACAGCAAATCATGACAATGAATAGGAAAGCAAGGGAAGAGTGGGAGAAAAAACAGGCTGAAGCAGACAAGCTCCGGAAACTAAATGATGTAGACGGTGGTTCCGGAGTTGATGGTGACAAGGAGAAGGATGATGGTCGCAATAAAGGAACAAAGGTGAACAAGGATGTAGATGACAAGATGAGGACAAATGCTGCAAATGTTGCAGCCCGAGCTGCTGTTGGAGGAGATGACATGCTGTCAAAGTGGCAACTTATGGCTGAGCAAGCCAAGCAAAAACGCGAAGGGGGGACGGACAATGCATCTGGTTCTCAGCCAGCTAAAGATGTCAGTCGCAAATCTTCACCATCATCTGGAAGGAACACAAGAGATAATCAAGAAAGGGAGAGAAAAGGTCCAACTTCTCTTGGGAATTCAGCGGCTGCTAGGAAATTTGGGAAAAATCAATCCCCTGGATCTCAAACTCGGATAGCTCGTAACATCTCTGTGAAGGATGTGATTGCAGTCTTAGAGAGGGAACCTCAGATGTCCAAATCATCACTCTTATATCGATTGCATGATAGGATTCATTCTGATACTTGA 2751 0.4282 MDPSIVKLLEDDEDETMHSGADVEAFQAALNRDIGGDASNSQLSDSDAGSNNSFSQSLSTWPTSSHDNQIDCQNQEPKIAQLQEQPSSEMVLKQEGPIVEQIRNVASQDASNLTLSHKKSQDEFLQRQTVPVSHQHPQTNEVLKSEKDPIFNHEAIKTSNPNCESQYAKLQQMSNQQATVNEQPSSQVNRSKQVPFGLLLPILIPQLAKDRAMQLQTLFNKLKRDEIPKDNFVRLMKGIVGDQMLRIALTKVQQQTKANTGSSGQQHPVRMPSVTSSGTKFNDPHALAQLHQRSMSAAPDHSHNTSSGIQVKSEPTYSTMDISAKKPQEHDVRVVQPTQLPSSSSNAVSQETERSSVHIQGLNKQQQQHIHFPSTYGSSGGNYIPFSGTTTGSSPSLRPQPHPHDSHMRQIPHQNIGLSHLGVERQSSFNDPKRMPGGSVPTVVNNTSSQQNSNSWQPSAEQNPGLFTSMSYVKKEPNDLSIDQQHRHHLSKLHGLPSVNSGQNEQGSGINQGPVKDEFSRGSVVSTSMPHTTSASLPPNSAAPSASQLDPTVSLSSQIPASTSGINAKAPLKKTPLGQKKPLEALGSSPPPPSKKQKVSGSSLEQSIEQLNDVAAVSGVDLREEEEQLFSGSKEDSRASEASRRVVQEEEESLILLKAPLQRKLIEIMTEYGLKGMSNDVEKCLSLCVEERMRGVISNIIRMSKQRVDIEKTRHRTVVTSDVRQQIMTMNRKAREEWEKKQAEADKLRKLNDVDGGSGVDGDKEKDDGRNKGTKVNKDVDDKMRTNAANVAARAAVGGDDMLSKWQLMAEQAKQKREGGTDNASGSQPAKDVSRKSSPSSGRNTRDNQERERKGPTSLGNSAAARKFGKNQSPGSQTRIARNISVKDVIAVLEREPQMSKSSLLYRLHDRIHSDT* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0865 916 MobiDBLite consensus disorder prediction 293 331 - -
Tpr7g0865 916 MobiDBLite consensus disorder prediction 810 884 - -
Tpr7g0865 916 Pfam RCD1-SRO-TAF4 (RST) plant domain 190 254 IPR022003 -
Tpr7g0865 916 ProSiteProfiles RST domain profile. 187 258 IPR022003 -
Tpr7g0865 916 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 365 913 IPR045144 GO:0005669|GO:0006352
Tpr7g0865 916 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 41 355 IPR045144 GO:0005669|GO:0006352
Tpr7g0865 916 MobiDBLite consensus disorder prediction 520 557 - -
Tpr7g0865 916 MobiDBLite consensus disorder prediction 819 844 - -
Tpr7g0865 916 PANTHER IP01149P-RELATED 41 355 - -
Tpr7g0865 916 PANTHER IP01149P-RELATED 365 913 - -
Tpr7g0865 916 MobiDBLite consensus disorder prediction 749 785 - -
Tpr7g0865 916 MobiDBLite consensus disorder prediction 864 883 - -
Tpr7g0865 916 Pfam Transcription initiation factor TFIID component TAF4 family 611 908 IPR007900 GO:0005669|GO:0006352
Tpr7g0865 916 MobiDBLite consensus disorder prediction 521 557 - -
Tpr7g0865 916 MobiDBLite consensus disorder prediction 36 68 - -
Tpr7g0865 916 MobiDBLite consensus disorder prediction 295 323 - -
Tpr7g0865 916 MobiDBLite consensus disorder prediction 583 605 - -
Tpr7g0865 916 Coils Coil 731 751 - -
Tpr7g0865 916 MobiDBLite consensus disorder prediction 256 277 - -
Tpr7g0865 916 CDD TAF4 606 907 IPR007900 GO:0005669|GO:0006352
Tpr7g0865 916 MobiDBLite consensus disorder prediction 625 645 - -
Tpr7g0865 916 Gene3D Histone, subunit A 656 701 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0865 Tpr-Chr7 7660223 7671172 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0865 K03129 - gmx:100797127 1293.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0865 7 7660223 7671172 Tpr7g0865 7 7660223 7671172 ECH