Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0858 ATGTCGAATCGTTACGGCCAGGCTAAACAACAAGATCATACCAACAACAACAATAAGGGTTTCAACAAAACTCAGAAGAAATTCGTCCCTAAAAATCCGACTCCAACCTTATCAACTTCCCTAAGAGAAAACCAACAAACTTCTTCCGGTACCAATTCCTCTTCGTCCGGTAGCGTCCAACCAGCGAGGGGTGTGAATAGAAATGGCAATTTCGTATATTATTTGCCACAAGATGAAGCAGTTGCTTCTGGTTTTGGTGCTGAGGATGGTGGATTGGATGCTCTTGAATCTCAGAAAGTTGTTGATCTTCTCAATTCACAGCTGTCTCGTTTGCTCAAGTTGAAACCCAAAGATTTTTGGTCACAAGTGGCTAGTGATACATCCTTGCATGAGTTTCTCAACAGCTTTCTGCAATTTAGGAGCAGATGGTATGATTTACCTCACCGCGGGACTAGAGGGATTGTTGCTGGTGTTATTTTTGGAGAGCATGATTTGAGCCGTCGGGTTTTCATGGTATTTTATCGAATGTCTTCCAATAGAGATCCTGGTGCTGGGCCTGCTGATACACTTAGTTTGAGAGATCATGAAGTTCTTTTGCAGGAGAGGAAGTTGCTTGATTTGCCAAAGTTGTTTGATATATGTGCCATATACAATCATGAAAATGAAGAATTGACAAGATTGCTGGTTAGAAAAGCTTTGCATGCCCAGCCTTGGGTGCATGATAATCTGACTGCAGTAACATCTCATTTTATGGTCATTGTAAGCACAATGCATGAACGATGCAGTTCATCATTGGAGGTCTTATTTGCTTCTGGAAGTCTTGATGACCATAGTGCTGCTTTTCTAAAAACTGATCTTCTGGAGGTGATGGACTTTATAAATGATGCATTCGTATCAATGGATGCTTTTGTTAGTGCATACGAACCAGCAGCTTTATGGTTCTCTTCCCCTGTTGAGATGAGTTATGGGAATGAAGAGCTGCTGAGCTTCCTTGCCAGATTGCATGATTCGCTAATTCCGTCCATGCAAAAGGGGTTCCATATCATTTTTGCTGACAAACAAGATGACTTGGTTTCTAATATTGTAGTTAGTTTGAAGATGTTAAGAATGAGATTGGTGAAGTTTGGGTGGCAGTTATTGCATTTATGCTATTTAAGTGATGACGTGTTCCTAGATAGCATCCCTCTTCCAGCTGCCACGAAGATGTTTCCTGCCAATGTAGAAGACCCAGTCATCAGAGCAGATATTCTCGTTCAAACATTTAGAGAGATCAATTCAGTATCATTAAGTTTCGGGGAAATCTACAAGAAGGAAACCTTTCTTCAAGATGTTGAAAGGAATTTCAATATATTAAGCAGGATTGAGGGATTAAAGCATAATGGGTGGATATTCATCGATGATGAACAACTTAAATATATATCTGGGATTTTGAGTTCTCCAAAGGAGATTAATAAAGAGCCATATTCTGCAGAGATCCCTGTGCCGAAGCAAGTCACGCAGACAGATGAAGATGCTGTAGTTTTAGAGTCAAAAATCAGTCAAATTAGGGACCTATTCCCTGATTATGGTAAAGGGTTTTTATCTGCATGTCTTGAGGTCTATGACCAGAATCCAGAAGAGGTTATTCAAAGAATTTTAGAAGGAACCCTGCATAAGGATCTGATGTGCTTGGATACTTCTTTAGAGACAGTGCCAAAGTCACTAGCCAAGTCTAACACTGTTAGCAGGAATGATAAAGGAAAAGGTATACTAATTGATTCTACGCCGGTGTCCTCAAATACAAAAGTTTTTAATGGGAAGCAACAGACAGTAGGGCCGTTGATGCCATCCTCTGTTCCACTTGGAAAATTTGTTAGGAAATCTACAGCCGACACTCCTGATGCAAGTATTTTGGACAATATGGATGAGATAGTTGCATCGAGAATTTTACAATATGAATATGATGATGAGTACGATGACTCTTTTGATGACTTGGGTCTAAGCGTAGCAGACTCTGGAGTAGAAGAAAATGAAATGCTTGACGACGAAATGAATGAAAAATCAGGGAAATCAAGGGCAACAGGGACTGGAAACTCTGTCCAAAATGGCTCTAATACAAAATGGGGCTCTAGGCAAAAGCCACAGTACTATGTCAAGGATGGTAAGAATTACAGCTACAAAGTGGCGGGTTCAGTAGCAGTTGCAAATTCTAATGAAGCTTCTTTAGTTAATGAAGCTCAGAAAGAATTGATACATGGCCTTGGGCGTGGCGGCAACCTTCCTCTTGGTGCGGTACAGAAGTTGGCAGGTTCCTACAAGGGAGGTGGTAACCAATTCCAAGTTTCTGAAACAGAAGGGAGAGGGAGTAGCAGTGGCAGGGGAAAGAGAGAAGGGGGAAGACATATTGAACATAATCAACATCAAGAAAAACAAGCTGATGTTTCTGAAGTGGAAGGTAGAGATCAGGGTCCAAATAACAGAGGGAGAGGGAGAGGAAGAGGAAGACATATTGAACATAATCAACATCAAGAAACACAATCTGATGATTCTGAAGTGGATGGTAGAGATCAGGGTCCAAATAACCGAGGGAGAGGGAGAGGAAGAGGGAGGGGAGGAGGTAGAAACAACCATTACAGGAAGGACCAAGCCATGAAGAAGCATTTCTCTGGATTGGGTGGTTTTTGA 2664 0.4133 MSNRYGQAKQQDHTNNNNKGFNKTQKKFVPKNPTPTLSTSLRENQQTSSGTNSSSSGSVQPARGVNRNGNFVYYLPQDEAVASGFGAEDGGLDALESQKVVDLLNSQLSRLLKLKPKDFWSQVASDTSLHEFLNSFLQFRSRWYDLPHRGTRGIVAGVIFGEHDLSRRVFMVFYRMSSNRDPGAGPADTLSLRDHEVLLQERKLLDLPKLFDICAIYNHENEELTRLLVRKALHAQPWVHDNLTAVTSHFMVIVSTMHERCSSSLEVLFASGSLDDHSAAFLKTDLLEVMDFINDAFVSMDAFVSAYEPAALWFSSPVEMSYGNEELLSFLARLHDSLIPSMQKGFHIIFADKQDDLVSNIVVSLKMLRMRLVKFGWQLLHLCYLSDDVFLDSIPLPAATKMFPANVEDPVIRADILVQTFREINSVSLSFGEIYKKETFLQDVERNFNILSRIEGLKHNGWIFIDDEQLKYISGILSSPKEINKEPYSAEIPVPKQVTQTDEDAVVLESKISQIRDLFPDYGKGFLSACLEVYDQNPEEVIQRILEGTLHKDLMCLDTSLETVPKSLAKSNTVSRNDKGKGILIDSTPVSSNTKVFNGKQQTVGPLMPSSVPLGKFVRKSTADTPDASILDNMDEIVASRILQYEYDDEYDDSFDDLGLSVADSGVEENEMLDDEMNEKSGKSRATGTGNSVQNGSNTKWGSRQKPQYYVKDGKNYSYKVAGSVAVANSNEASLVNEAQKELIHGLGRGGNLPLGAVQKLAGSYKGGGNQFQVSETEGRGSSSGRGKREGGRHIEHNQHQEKQADVSEVEGRDQGPNNRGRGRGRGRHIEHNQHQETQSDDSEVDGRDQGPNNRGRGRGRGRGGGRNNHYRKDQAMKKHFSGLGGF* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0858 887 Gene3D - 505 550 - -
Tpr7g0858 887 ProSiteProfiles CUE domain profile. 507 550 IPR003892 GO:0043130
Tpr7g0858 887 MobiDBLite consensus disorder prediction 1 62 - -
Tpr7g0858 887 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 818 885 - -
Tpr7g0858 887 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 15 805 - -
Tpr7g0858 887 SMART cue_7 507 549 IPR003892 GO:0043130
Tpr7g0858 887 MobiDBLite consensus disorder prediction 769 887 - -
Tpr7g0858 887 CDD CUE_ASCC2 509 548 IPR041800 -
Tpr7g0858 887 MobiDBLite consensus disorder prediction 683 705 - -
Tpr7g0858 887 MobiDBLite consensus disorder prediction 670 706 - -
Tpr7g0858 887 Pfam CUE domain 509 549 IPR003892 GO:0043130
Tpr7g0858 887 MobiDBLite consensus disorder prediction 830 856 - -
Tpr7g0858 887 SUPERFAMILY UBA-like 506 564 IPR009060 GO:0005515
Tpr7g0858 887 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 818 885 - -
Tpr7g0858 887 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 15 805 - -
Tpr7g0858 887 MobiDBLite consensus disorder prediction 782 821 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0858 K18667 - gmx:100778129 1174.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0858 7 7617735 7625228 Tpr7g0858 7 7617735 7625228 ECH