Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0840 ATGTCATCATGGCTCGCTCGTTCCCTTGCAAATTCTCTTCGACTCGATGACGTCGACAACATTGAAAACGACATCGTAACCGATTCCTCAACCACCACCTCACCCACAAATCAACATCAACAACACCAACACAATAATAATGCTCTTAGATCACAATTAGAACAATATAATGATGAAGACGATGAAACGCAAGGTCGTGGTGGTGGTAGTGTTAAAGAAGACCTCGACGAAATCAAACAAACCCTAACCCGCCAATTTTGGGGTATGGCTTCATTTCTCGCTCCTCCTCCTCCTCCAACTATTTCGAATCAACAAGTTGATGATGCTGTAATTTCGAATCAATCTTCGGATGTGGAAAATGGTATTGTCCGTAGGGATGATCCTGACCCGAATTTGAATACATTTGGATCCGATTCGGAAGGGGAAAGAGAACAGGAGCTTGATATTCAATGCGCGGTTGGAATTACGGACGAGGTCCTCACTTTTGCAATGAATATCGCAATGCATCCTGAGACTTGGTTGGATTTTCCTATTGATGAGGAAGATGATACACATGATTTTTACATGTCCGACGTCCAACGAGATCATGCTGTGGTTGTTGAAAGACTTGCTCCGAGATTAGCTGCGCTCAGAATTGAACTTTGCCCTTGCCATATGAGTGAAAGTTACTTCTGGAAGGTCTATTTTGTACTTTTGCATTCAAGGCTTAATAAACAAGATTCAGAGATTTTGTCTACACCCCAGGTCATGGCAGCCAGAGCTATGTGGATGCAGGAATTGCAGAAACAAACTAAGCCTGAATTTGAACTTTACGGAAGAAGTTATCTCTACTCAAGAGACAATGCTCAGCATCATGATTCTACTCCCAGCTTATTAGATGACACCTATTCTGATGACATGCCTCATCAAACATATGGATATAGAACAACCTCTTCCTCTGTGGTGGCAGATAATGAGTCTGAGAAGTACACAGTCGAAAGTTTTGGATCACATTTCTATGATAAGTCAGTTACTGAGCAAAATCCAATCATTAAAACTGAAAAAAAGGATCTAAAAAGTGGTCGACCATCTCAAATTATTATTCAGGACCATGATGACGACGGAGATGATGATTGGCCAGAAGATGATTCTGGATATGGAGGAATAACACTCCCTATTGTTAATGAAGAAGACATATCTTTCAGCGATCTTGAGGATGATGATTATGGCATTAAGCATGTTAATACCAATTCAAGTTCAAAGGTGGTATAA 1251 0.4085 MSSWLARSLANSLRLDDVDNIENDIVTDSSTTTSPTNQHQQHQHNNNALRSQLEQYNDEDDETQGRGGGSVKEDLDEIKQTLTRQFWGMASFLAPPPPPTISNQQVDDAVISNQSSDVENGIVRRDDPDPNLNTFGSDSEGEREQELDIQCAVGITDEVLTFAMNIAMHPETWLDFPIDEEDDTHDFYMSDVQRDHAVVVERLAPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKQDSEILSTPQVMAARAMWMQELQKQTKPEFELYGRSYLYSRDNAQHHDSTPSLLDDTYSDDMPHQTYGYRTTSSSVVADNESEKYTVESFGSHFYDKSVTEQNPIIKTEKKDLKSGRPSQIIIQDHDDDGDDDWPEDDSGYGGITLPIVNEEDISFSDLEDDDYGIKHVNTNSSSKVV* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0840 416 MobiDBLite consensus disorder prediction 361 383 - -
Tpr7g0840 416 SMART wurzfinal6 184 236 IPR005607 -
Tpr7g0840 416 Pfam BSD domain 185 240 IPR005607 -
Tpr7g0840 416 Gene3D BSD domain 133 246 IPR035925 -
Tpr7g0840 416 PANTHER BSD DOMAIN-CONTAINING PROTEIN 3 412 - -
Tpr7g0840 416 MobiDBLite consensus disorder prediction 115 144 - -
Tpr7g0840 416 ProSiteProfiles BSD domain profile. 184 236 IPR005607 -
Tpr7g0840 416 Coils Coil 39 66 - -
Tpr7g0840 416 PANTHER BSD DOMAIN-CONTAINING PROTEIN 3 412 - -
Tpr7g0840 416 SUPERFAMILY BSD domain-like 154 240 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0840 Tpr-Chr7 7440354 7445022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0840 151 234 EF-hand Containing Proteins AT1G69030 31.915 6.45e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0840 - - gmx:100794286 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0840 7 7440354 7445022 Tpr7g0840 7 7440354 7445022 ECH