Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0803 ATGGCGGAGGAAGCACAATATACCCTAAAACGCAAATACGACGACCAACCCAACGCCATCGACATCAACCTCGAAGTCGCCAACGCCAAACTAAAAGCTCAAGAAGCCGCCGCTCGTCTCCTCAATGCCACCGCCGCTCCACCACTTTCCTTCGATCCCAAACGAACTAAATCTGATAACGGTGCTCCACAATCTGGATTCGATTCTTATGATTTGAAGCCTCAATACTCAGCAGCTTCTTATGGTTCTAGTAAGAAGATCGAAATACCTAATGGTAGGGTTGGTGTTCTTATTGGTAAAGGTGGTGAAACTATTAAGTATCTTCAGTTACAATCTGGTGCTAAAATTCAAGTTACTCGTGATATGGATGCTGACCCTAATTCTACGATGCGGATGGTTGAACTTACTGGTACTTCTGATGCTGTTGCTTCTGCCGAGAAACTCATCAATGATGTTCTTGCTGAGGCTGAATCTGGGGCTTCTGGTGGTGGTACTAGGCGGATGGCTGCACAATCTGGGGGTGATGAATTTGCGATGCAAATACCAAACAATAAGGTTGGCCTTATAATTGGTAAAGGAGGAGAAACAATTAAGAGCATGCAAGCTTCAACTGGAGCACGGATTCAGGTGATACCTTTGCATCTTCCCCCGGGTGATACGTCAACAGAAAGAACATTAAAAATTGATGGGGGCCCTGAGCAAATTGAATCAGCAAAGCTATTGGTTAATCAAATCCTTGCGGGTGAGAATCGTCTCAGAAATTCAGGGAACTCTGGTGGTTATACTCAGCAAGGTTACCAATCCCGACCACCATCTGGCTGGGCTCCTCCTGCTGCTCCCACGCAACAACCTGGTTATGGCTATGGGCAACCTGGATCATACTCTGGCCCTTCTCAGTATAACATGCAACAGCCTCCATACCCTGGCTACCCTCCCCAGCAAGCTGGTGGATACGCTGCCAATTGGGACCAGTCCACGGTACCATCACACCAGCAGTCTACTCATGCAAGTGGTTATGATTATTACAATCAACAACCCCAGCAACAGCAAAATTCTGGGGTCCCTGCACAGCAAGCTGATGGGTCTACTTACAATTACAGTCAACCACCTTCATCTGGTTATACCCAACCAGGACAGGGTTATGGTCAGGAAAGCTATGGTGCATATAATGCGCAACAACAATCAGGGTATGCTCAGCCACCAACATATGATCAGCAACAAGGTTATGGCTCAGCTCCCAGCTATGGTAGTGGGAGTAACCCAACTCAAGAAGGGCACACTTCCAACTATGCATCACAAGGAGATTCAACCCAAACTTCCCAACCCTCTACCGTTCCCCAGCAAGGCTATGCTACCAACCAACAAGGAACTCCTCAACCAGGTTATGGGGTAGCTCCTGCCTCCCAAGCGACCTATGGCAATCAACCACAGTCTGGTTATGGTGCCCCTCCATCACAAAAGCCAAGTGGAAATCCACCTGTTTATGGTCAATCACAGTCACCTAGCACAGCGGGAGGCTATGGTCAGTCAGCATATTCTACCCAGCCCCCACCTTCTGGATATGGTGCTCAATCATATGGTGCTCCTCAAGGTGGCCAAGCAGGGTATGGTTCTCAATCATATGGTGCTCCTCAAGGTGGCCAACCTGGCTATGGCCAGACTCCACCATCGTATGGAAACAGTTCTTATGGTGCTGCTGGTTATACTCAGGCTCCAGCATATGCTAGTGATGGAGTAACTGCACAGGCTGTTCAACAGGGTGGGGTTGCTAAAGTGTCGCCCAAGAGTTAA 1791 0.4835 MAEEAQYTLKRKYDDQPNAIDINLEVANAKLKAQEAAARLLNATAAPPLSFDPKRTKSDNGAPQSGFDSYDLKPQYSAASYGSSKKIEIPNGRVGVLIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTMRMVELTGTSDAVASAEKLINDVLAEAESGASGGGTRRMAAQSGGDEFAMQIPNNKVGLIIGKGGETIKSMQASTGARIQVIPLHLPPGDTSTERTLKIDGGPEQIESAKLLVNQILAGENRLRNSGNSGGYTQQGYQSRPPSGWAPPAAPTQQPGYGYGQPGSYSGPSQYNMQQPPYPGYPPQQAGGYAANWDQSTVPSHQQSTHASGYDYYNQQPQQQQNSGVPAQQADGSTYNYSQPPSSGYTQPGQGYGQESYGAYNAQQQSGYAQPPTYDQQQGYGSAPSYGSGSNPTQEGHTSNYASQGDSTQTSQPSTVPQQGYATNQQGTPQPGYGVAPASQATYGNQPQSGYGAPPSQKPSGNPPVYGQSQSPSTAGGYGQSAYSTQPPPSGYGAQSYGAPQGGQAGYGSQSYGAPQGGQPGYGQTPPSYGNSSYGAAGYTQAPAYASDGVTAQAVQQGGVAKVSPKS* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0803 596 CDD KH-I 84 149 - -
Tpr7g0803 596 SMART kh_6 173 247 IPR004087 GO:0003676
Tpr7g0803 596 SMART kh_6 81 154 IPR004087 GO:0003676
Tpr7g0803 596 Pfam KH domain 85 151 IPR004088 GO:0003723
Tpr7g0803 596 Pfam KH domain 179 243 IPR004088 GO:0003723
Tpr7g0803 596 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 172 248 IPR036612 GO:0003723
Tpr7g0803 596 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 85 159 IPR036612 GO:0003723
Tpr7g0803 596 Coils Coil 24 44 - -
Tpr7g0803 596 MobiDBLite consensus disorder prediction 531 558 - -
Tpr7g0803 596 ProSiteProfiles Type-1 KH domain profile. 174 242 - -
Tpr7g0803 596 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 42 581 - -
Tpr7g0803 596 ProSiteProfiles Type-1 KH domain profile. 82 149 - -
Tpr7g0803 596 PANTHER K DOMAIN-CONTAINING PROTEIN-RELATED 42 581 - -
Tpr7g0803 596 CDD KH-I 179 242 - -
Tpr7g0803 596 MobiDBLite consensus disorder prediction 366 558 - -
Tpr7g0803 596 MobiDBLite consensus disorder prediction 366 521 - -
Tpr7g0803 596 Gene3D K Homology domain, type 1 77 171 IPR036612 GO:0003723
Tpr7g0803 596 Gene3D K Homology domain, type 1 172 273 IPR036612 GO:0003723
Tpr7g0803 596 MobiDBLite consensus disorder prediction 253 270 - -
Tpr7g0803 596 MobiDBLite consensus disorder prediction 253 280 - -
Tpr7g0803 596 MobiDBLite consensus disorder prediction 44 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0803 Tpr-Chr7 7096250 7100469 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0803 K13210 - gmx:100813135 642.114