Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0768 ATGGGTGAGGCTCCTGAGCTACTCTACGTTAATGGGTTTGGCCATGACCATGATGATCAAATAGAACAACACCTTACCAATAACTATGACCATGATTTTTCTTGGTACGAGGAAGTTATCGATGATGATCTCAAATGGTCTTTTGCTTTGAACAGTGTGCTTCATAAAGGGACTAGTGATTACCAAGAGATAGCTCTTTTGGATACAAAGCGTTTTGGAAAGGCCCTAGTCATTGATGGGAAGATGCAAAGTGCTGAAATCGACGAATTTATTTATCATGAATGCTTGATTCATCCCCCTCTCTTATGTCACCCCAACCCCAAAAGAGTGTTTATAATGGGAGGAGGTGAAGGGTCTGCTGCAAGGGAATCCCTCAAGCACAAGTCAATAGAGAAAGTTATCATGTGCGATATAGACCAGGAGGTGGTAGATTTCTGCAGAAAATACTTGATTACAAATAGTGAGGCCTTTGCTCATAAGAAGCTCAACCTTGTCATCAATGATGCCAGGGTGGAATTAGAGAAAAGGAAAGAGAAATTTGATATCATTGTTGGAGACTTGGCAGACCCAGTTGAAGGTGGACCTTGCTATCAACTTTATACAAAATCTTTCTATGAGAATATCCTCAAGCCCAAGCTCAATGAGAATGGCATTTTTGTCACTCAGGCAGGACCGGCAGGTATCTTGACGCACAAGGAAGTCTTCACTTCTATATATAACACAATCAAACAAGTCTTTAAATATGTGATAGCATACACAACTCATGTACCATCATTTGCTGATACTTGGGGATGGGTTATGGCTTCAGACCAACCATTATTCATTGGTTCTGAGGAAATGGACAAAAGAATGAAAGAAAGAATAAATGGAGAATTGCTCTATCTAACTGGAGACTGGTTCCACTCATCTACCACCATGAACAAGACTCTTTCACAGTCGCTTCAGAATGAAACTCATGTGTACACTGAAGAAAATGCTAGATTCATTCCTGGACACGGCGTGGCTTATCGTCACTGA 1017 0.409 MGEAPELLYVNGFGHDHDDQIEQHLTNNYDHDFSWYEEVIDDDLKWSFALNSVLHKGTSDYQEIALLDTKRFGKALVIDGKMQSAEIDEFIYHECLIHPPLLCHPNPKRVFIMGGGEGSAARESLKHKSIEKVIMCDIDQEVVDFCRKYLITNSEAFAHKKLNLVINDARVELEKRKEKFDIIVGDLADPVEGGPCYQLYTKSFYENILKPKLNENGIFVTQAGPAGILTHKEVFTSIYNTIKQVFKYVIAYTTHVPSFADTWGWVMASDQPLFIGSEEMDKRMKERINGELLYLTGDWFHSSTTMNKTLSQSLQNETHVYTEENARFIPGHGVAYRH* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0768 338 CDD AdoMet_MTases 109 222 - -
Tpr7g0768 338 Hamap Polyamine aminopropyltransferase [speE]. 34 315 IPR001045 GO:0003824
Tpr7g0768 338 Pfam Spermidine synthase tetramerisation domain 35 86 IPR035246 -
Tpr7g0768 338 Gene3D Spermidine synthase, tetramerisation domain 34 85 IPR037163 -
Tpr7g0768 338 PANTHER BNAA02G04280D PROTEIN 1 338 - -
Tpr7g0768 338 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 1 338 - -
Tpr7g0768 338 Pfam Spermine/spermidine synthase domain 89 267 - -
Tpr7g0768 338 Gene3D Vaccinia Virus protein VP39 86 337 IPR029063 -
Tpr7g0768 338 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 33 270 IPR030374 -
Tpr7g0768 338 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 34 314 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0768 Tpr-Chr7 6814147 6816633 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0768 K18787 - gmx:100815510 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0768 7 6814147 6816633 Tpr7g0768 7 6814147 6816633 ECH