Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0741 ATGGCGAATTTGGATCAATCCCAGTTCAGCGACAACGAAGACGATTACGAACTTCCTCTCACTCAAACACCATCTCTTCAACCTCTTTCAGACTCCAATACCACCAATACTCAACGACCTTCCAAGAAACCCAAAACCAAAACGACTGCGTTTCCTGGCAAAGAAAACATTCCCCCTTTGGATGATAATTCTAGTTTAGATTTCGTTCCTTCCACCTTAGATCCTGATTCCACCGCTCAAACCGTTTGTTCTTCTTCTGCTTCTCAACTGAAGAAGATTAACAAACGCGCTTATTTTCATAATTCATTAGAGTCTAGGTTGGTTGCATCGAGAGCGAATGTTTTCGATTATGGAGAGTCCGGTTCGAAGGTGAATTTTGATGGTTCCGTTGATTGTCCTCTCTGTGGTGTTGATATTTCTAATTTAACGGAGGAACAACGTCATCTTCATACCAATGATTGTCTTGATAAAGCTGGAGAAGATGTTGCTCTTCCTGGTGATGATGTGGGAGCTCAATCTGCGGCTAACGTCTCTCCTGTTGTTGATTGGCTACACGATCTCGGTTTAGCTAAATATGAAGAAGTTTTCGCTAGGGAAGAAGTTGATTGGGACACTTTGCAATGGCTGACTGAAGAGGATCTCTTAAACATGGGCATAACTGCACTTGGTCCCAGAAAAAAGATTGTGCATGCCCTGTCAGAACTCAGAAGAGGATGTGCCTCTTCAAGTTCAAACGTGAAAATTGGGGATGCTGGGGTAGACCCTAGAAAGAGTAGAAACCAGAAAGGCAAATCACAACATGACAAATCTGAAAGGAAAGCCAACGAAAATGTTAAACCAGCAGCAAACAAATTAATTACTGAATATTTTCCGGGATTTGTTACCAAAGAGAAGAAAGCTTCTGGCCCTTCTGCAGAACAACATGAAACAAAAAATAGTGACTCGGTTTCTGATCGAAAGCGCAAAGCAAAAGATATATCCACAAGTGCAAAGATTCGTGATGTTCCTAAATGGTGTGCCATACAAGGAACACCTTTCCGAGTTGATGCTTTCAAATACCTAAGAGGAGATTGTTCGCACTGGTTTCTCACACACTTCCACATGGACCATTATCAAGGTCTCACCAAGTCATTCAATCATGGAAAGATCTATTGCTCCTCTGTTACAGCTAGACTTGTAAATATGAACATGGGAATTCCATATGATAAATTACACATTTTGCATCTAAACCAAAAAGTTGAAATAGCTGGTATTGGTGTGACTTGCTTGGATGCCAACCATTGTCCAGGTTCCATAATGATACTCTTTGAACCTCCGAATGGTAAGGCTGTACTTCACACAGGTGATTTTCGTTATAGTGAAGAAATGGCAAACGACCCTTTCATGCGAATATGTCCTATTGACACTTTAATTCTTGATACCACATACTGTAACCCACAGTACGACTTTCCAAAACAAGAGGCTGTAATACAATTTGTTATTGATGCCATTCAAGCAGAAGCTTTTAATCCCCAGACTCTTTTTCTTATTGGCAGCTATACAATTGGAAAAGAAAGGCTATTCTTGGAGGTTGCTCGTTCACTTCGCAAAAAGGTTTATGTGACTGCAGCAAAGTTACGCCTTTTAAAATGTTTGGAATTTACGGAGGAGGATATGCAGTGGTTTACTTCCAATGAGCATGAAAGCAACATTCATGTTGCCCCTATGTGGACACTTGCAAGCTTCAAAAGATTGAAGCACATATCAAGTCAATATGCGAGTCGGTTCAGTCTTATAGTTGCTTTCTCTCCTACTGGTTGGACATTTGGCAAAGGTAAGAAGAAGTCTCCCGGAAGAAGGTGGCAGCAGGGTACTGTTATAAGGTATGAAGTTCCTTACAGTGAGCATTGCAGCTTTACAGAACTTAAAGAGTTTGTAAATTTTTTATCTCCCAATAATATTATACCGAGTGTGAATAATGATGGACCTGAATCTGCCGACGCAATGATTTCTTCTCTCATGTCAACTTGA 2010 0.407 MANLDQSQFSDNEDDYELPLTQTPSLQPLSDSNTTNTQRPSKKPKTKTTAFPGKENIPPLDDNSSLDFVPSTLDPDSTAQTVCSSSASQLKKINKRAYFHNSLESRLVASRANVFDYGESGSKVNFDGSVDCPLCGVDISNLTEEQRHLHTNDCLDKAGEDVALPGDDVGAQSAANVSPVVDWLHDLGLAKYEEVFAREEVDWDTLQWLTEEDLLNMGITALGPRKKIVHALSELRRGCASSSSNVKIGDAGVDPRKSRNQKGKSQHDKSERKANENVKPAANKLITEYFPGFVTKEKKASGPSAEQHETKNSDSVSDRKRKAKDISTSAKIRDVPKWCAIQGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTKSFNHGKIYCSSVTARLVNMNMGIPYDKLHILHLNQKVEIAGIGVTCLDANHCPGSIMILFEPPNGKAVLHTGDFRYSEEMANDPFMRICPIDTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAEAFNPQTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLKCLEFTEEDMQWFTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHCSFTELKEFVNFLSPNNIIPSVNNDGPESADAMISSLMST* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0741 669 PANTHER DNA CROSS-LINK REPAIR 1A PROTEIN 130 664 - -
Tpr7g0741 669 MobiDBLite consensus disorder prediction 301 327 - -
Tpr7g0741 669 Pfam Beta-lactamase superfamily domain 362 481 IPR001279 -
Tpr7g0741 669 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 130 664 - -
Tpr7g0741 669 SUPERFAMILY SAM/Pointed domain 176 237 IPR013761 -
Tpr7g0741 669 Gene3D - 171 246 IPR013761 -
Tpr7g0741 669 SMART Lactamase_B_5a 326 481 IPR001279 -
Tpr7g0741 669 SMART SAM_4 172 238 IPR001660 GO:0005515
Tpr7g0741 669 MobiDBLite consensus disorder prediction 297 327 - -
Tpr7g0741 669 SUPERFAMILY Metallo-hydrolase/oxidoreductase 346 650 IPR036866 -
Tpr7g0741 669 Pfam DNA repair metallo-beta-lactamase 550 654 IPR011084 -
Tpr7g0741 669 MobiDBLite consensus disorder prediction 1 45 - -
Tpr7g0741 669 CDD SAM_superfamily 180 234 - -
Tpr7g0741 669 Gene3D - 341 651 IPR036866 -
Tpr7g0741 669 Pfam SAM domain (Sterile alpha motif) 176 236 IPR001660 GO:0005515
Tpr7g0741 669 MobiDBLite consensus disorder prediction 1 63 - -
Tpr7g0741 669 CDD SNM1A-1C-like_MBL-fold 331 479 - -
Tpr7g0741 669 MobiDBLite consensus disorder prediction 252 278 - -
Tpr7g0741 669 Gene3D - 482 629 - -
Tpr7g0741 669 MobiDBLite consensus disorder prediction 243 278 - -
Tpr7g0741 669 ProSiteProfiles SAM domain profile. 175 238 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0741 Tpr-Chr7 6587159 6593366 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0741 178 232 Glycosyltransferase AT3G07170 49.091 3.81e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0741 K15340 - gmx:100816321 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0741 7 6587159 6593366 Tpr7g0741 7 6587159 6593366 ECH