Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0738 ATGGCTAGTAACGAACGTGACATGTTTTCAGCTGAAATTGTGAACCGGGGTATCGAATCTTCTGGTCCGAATGCCGGTTCATTGACATTCTCCGTTCGTGTTCGAAGACGGTTACCGGATTTTCTTCAATCCGTTAACCTTAAGTATGTGAAATTGGGTTACCATTATCTTATAAACCATGGTGTTTATTTGTTCACTGTACCAATTTTACTTTTGGTTTTTAGTGCTGAGGTTGGTAGTTTGAGTAGAGAAGATCTTTGGAAGAAGATTTGGGATGAAGCAAGTTATGATCTTGCTTCTGTTCTCTCTTCTGTTGCTGTTTTTGTTTTCACTTTCACTCTTTACTTCATGTCAAGGCCTCGTCCTATTTATCTCATTGATTTTGCATGCTACCAACCTGATGATGAACTCAAGGTATCAAGAGACCAATTGATAGAGCTAGCTAGAAAATCAGGAAAATTTGATGAAGAAAGTTTAGAATTCCAAAAGAGAATTGTAATGTCTTCAGGAATAGGTGATGAAACATACATTCCAAAATCAGTGATAGCATCAAGTGAAAACACAGCAACAATGAAAGAAGGTAGAGCTGAAGCATCAATGGTTATGTTTGGTGCACTTGATGAACTCTTTGAAAAAACAGGAATTAGACCAAAAGATGTTGGTATTTTAGTAGTTAATTGTAGCATATTTAATCCAACACCATCATTATCAGCAATGATTATTAATCATTATAAGATGAGAGGAAATATTTTGAGTTATAATCTTGGTGGTATGGGTTGTAGTGCTGGAATTATTGCTGTTGATTTGGCTAGAGATATACTTCAATCTAATCCTGGTAATTATGCTGTTGTTGTTAGTACTGAAATGGTTGGATTTAATTGGTATCAAGGAAAAGAAAGATCAATGCTTATTCCTAATTGTTTCTTTCGAATGGGTTGTTCTGCTCTTTTGGTTTCTAACCGTCGTCGCGATTATAGCCGCGCGAAATATCGTCTTGAACATATTGTTCGTACACATAAAGGTGCCGATGATCGCAGTTTCAGGTGTGTGTACCAAGAGGAAGATGATCAAAAGTTCAAGGGACTAAAGATAAGTAAAGACTTGATTGAAATCGGGGGCGAAGCTCTCAAAACAAACATCACAACACTAGGACCATTAGTCCTACCATTTTCAGAGCAGCTTATTTTCTTTGCAACATTAGTCTGGAGGAACTTATTTGGTGGTGGAAAATCTGATAAAAATTCATCATCATCAAAAAAGCCATACATTCCTAACTACAAACTAGCTTTTGAGCATTTCTGTGTGCATGCTGCTAGCAAAGCAATTCTTGATGAACTTCAAAAGAATCTTGAATTGAGTGACAAGAACATGGAAGCTTCTCGAATGACACTGCACCGATTCGGTAACACTTCTAGTAGTAGCATTTGGTATGAACTTGCTTATATGGAAGCTAAAGAAAAAGTTAAAAGAGGAGACCGTATTTGGCAACTTGCTTTTGGTTCTGGTTTTAAGTGTAACAGTGCTGTTTGGCGTTCGATGCGTCGTGTCGCAAAACCAACTTCTAGGAACCCTTGGCTTGACAGCATCAATGCATATCCAGCTTCTCTCAACTGA 1614 0.3755 MASNERDMFSAEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGVYLFTVPILLLVFSAEVGSLSREDLWKKIWDEASYDLASVLSSVAVFVFTFTLYFMSRPRPIYLIDFACYQPDDELKVSRDQLIELARKSGKFDEESLEFQKRIVMSSGIGDETYIPKSVIASSENTATMKEGRAEASMVMFGALDELFEKTGIRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPGNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLVSNRRRDYSRAKYRLEHIVRTHKGADDRSFRCVYQEEDDQKFKGLKISKDLIEIGGEALKTNITTLGPLVLPFSEQLIFFATLVWRNLFGGGKSDKNSSSSKKPYIPNYKLAFEHFCVHAASKAILDELQKNLELSDKNMEASRMTLHRFGNTSSSSIWYELAYMEAKEKVKRGDRIWQLAFGSGFKCNSAVWRSMRRVAKPTSRNPWLDSINAYPASLN* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0738 537 SUPERFAMILY Thiolase-like 333 512 IPR016039 GO:0016746
Tpr7g0738 537 Coils Coil 443 463 - -
Tpr7g0738 537 SUPERFAMILY Thiolase-like 109 327 IPR016039 GO:0016746
Tpr7g0738 537 PANTHER 3-KETOACYL-COA SYNTHASE 5 534 IPR012392 GO:0006633|GO:0016020|GO:0016747
Tpr7g0738 537 PANTHER 3-KETOACYL-COA SYNTHASE 10 5 534 - -
Tpr7g0738 537 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 431 511 IPR013747 -
Tpr7g0738 537 PIRSF Very_long_ch_3-ktacl-CoA_syn 40 537 IPR012392 GO:0006633|GO:0016020|GO:0016747
Tpr7g0738 537 Gene3D - 123 513 IPR016039 GO:0016746
Tpr7g0738 537 CDD CHS_like 105 510 - -
Tpr7g0738 537 Pfam FAE1/Type III polyketide synthase-like protein 115 404 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0738 Tpr-Chr7 6546263 6550840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0738 3 536 Miscellaneous Gene Families AT2G26250 74.773 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0738 K15397 - gmx:100778487 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0738 7 6546263 6550840 Tpr7g0738 7 6546263 6550840 ECH