Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0717 ATGGCGTTGATTAATCCATTTCTTCTCCCTACCAAAACTCATCTTGGTTTGCATGTTTCACCTCTAACATCCAAAAAAACACTCCTTTGGACTAGCCCATCTTCTAGTTTCAATTTCAATTTCAACAAAGGTTTGTCATCATCAAGAAGAAGGAAGCAAGCAGGGTGTGTCACCGCTGCGGCAGATATCAAAGCTGCATCAACTTTACTTGATGGAGAAGAAGATCAGAAAGTTCTAGTGGGACCTTCAAGTGAACAAGAACGAAGAGGTGAAAGAGAGCTTGTAGCTTATGGTTGGACAGAGGAATGGTACCCTTTGTACCTCACTAAGAATGTACCACATGATGCACCATTGGGTCTCAAAGTGTTTGATAAGAACCTTGTTTTGTTTAAAGATGGTAATGATCAGTTTCAATGCTATGAAGATAGATGCCCTCACAGGTTAGCAAAACTATCTGAAGGCCAGTTGATTGATGGAAGGCTTGAATGCCTATATCATGGATGGCAATTCGAAGGCGCAGGAAAATGTGTAAAGATACCTCAGCTTCCTGCTGATGCCAAAATTCCCAAGTCAGCCTGTGTCAAAACATATGAAGTGAGGGACTCTCAGGGTGTAATTTGGGTATGGATGTCTCAAATGACAGCTCCAAATGAGAGTAAATTACCTTGGTTTGAGAACTTTGCAAGGCCAGGGTTTCAAGATGTTTCAACAACTCATGAACTCCCATATGATCATTCCATTCTACTAGAAAACTTGATGGATCCTGCTCATATTCCAATCTCGCACGACAGAACAGATTGGACTGCAAAAAGAGAAGATGCGCAGGCACTATGTTTCGAGGTGACTGAACGAACTGATAGAGGTTTTGCAGGTTGGTGGGGACGAGAGAAAGATGGTACTAAGCCTAACTTCTTACGGTTTGAGGCTCCTTGTGTTCTACAAAATAACAGGGAAATTGTTGATAAAAATGGTGAAATAAACTACTTCAGTGGTTTGTTCCTTTGTAGACCAACTGGGCAAGGGAAATCCATGCTGATAGTGAGGTTTGGAGGAACAAAAAGATCTCCATTAGTAAAACTGTTTCCTCAATGGTACTTCCATCAGAATGCAAGCAAGGTTTTTGAACAAGACATGGGATTTCTATCGTCCCAAAATGAAATTCTTTTGAAAGAAAAGGTTCCAACAAAGGAACTATACCTGAACTTAAAATCATCAGACACGTGGGTTGCTGAATACCGGAAGTGGATGGATAAAGTGGGACACGGGATGCCATATCATTTCGGTCACAGCACTATTTCATTGCCCAAAGAGCCTGCTGTGGTTGAACATGCACCTGCTGGACTTGTCGCAGGACTATCAGCTTCCTCGCCGGCAAAGGGGGGCATTGGAACAATGCATGCCCCAAATTTAGCTAATAGATATTTTAGACACGTAATACATTGCAAAGGATGTAGTGCCGCCGTCAAAGCTTTTCAAACTTGGAAAAATGTCCTTTCAGCTGTGGCTGTTACATTAGCTGCATTGGCAATTCTGGTATCTGGGAGACAATGGAAAACCCTCCTGTTGGCATCTGCAGCCCTGTGCTCTGCTGGAGTATATGCTTGTTCAACAGCTATTGCATTGAATACAACAAACTTTATTAGGACACATAGGAGGTTGTGA 1662 0.4224 MALINPFLLPTKTHLGLHVSPLTSKKTLLWTSPSSSFNFNFNKGLSSSRRRKQAGCVTAAADIKAASTLLDGEEDQKVLVGPSSEQERRGERELVAYGWTEEWYPLYLTKNVPHDAPLGLKVFDKNLVLFKDGNDQFQCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGAGKCVKIPQLPADAKIPKSACVKTYEVRDSQGVIWVWMSQMTAPNESKLPWFENFARPGFQDVSTTHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQALCFEVTERTDRGFAGWWGREKDGTKPNFLRFEAPCVLQNNREIVDKNGEINYFSGLFLCRPTGQGKSMLIVRFGGTKRSPLVKLFPQWYFHQNASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKEPAVVEHAPAGLVAGLSASSPAKGGIGTMHAPNLANRYFRHVIHCKGCSAAVKAFQTWKNVLSAVAVTLAALAILVSGRQWKTLLLASAALCSAGVYACSTAIALNTTNFIRTHRRL* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0717 553 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 103 208 IPR017941 GO:0051537
Tpr7g0717 553 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 57 553 - -
Tpr7g0717 553 Gene3D - 98 227 IPR036922 GO:0051537
Tpr7g0717 553 Gene3D - 230 421 - -
Tpr7g0717 553 Pfam Pheophorbide a oxygenase 307 392 IPR013626 GO:0010277
Tpr7g0717 553 Pfam Rieske [2Fe-2S] domain 102 184 IPR017941 GO:0051537
Tpr7g0717 553 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 57 553 - -
Tpr7g0717 553 SUPERFAMILY ISP domain 97 212 IPR036922 GO:0051537
Tpr7g0717 553 SUPERFAMILY Bet v1-like 204 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0717 Tpr-Chr7 6355106 6358186 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0717 - - gmx:100818625 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0717 7 6355106 6358186 Tpr7g0717 7 6355106 6358186 ECH