Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0687 ATGTCGGATGTACCTAAAGATGTACAGAAAGATTTACCGAAAGGTGATTCGATTCAAATCAGAGAGGTTTGGAATTATAATCTCGAAGAAGAAATTGCTTTGATTCGTGAAATTGTTGATGAATTTAACTATGTTGCTATGGATACCGAATTTCCTGGTGTTGTTCTTCGTCCTGTAGGAAATTTTAAGCACATCAATGATTTTAATTATCAGACTTTGAAAGATAACGTTGATATGTTGAAGCTGATTCAGTTAGGTTTAACTTTTTCTGATGAGAATGGAAATTTACCTACTTGTGGCACCGAAAGTCCTTGCATCTGGCAATTCAACTTTCGCGAGTTCAACATCAGCGAAGATATTTTCGCTGCTGATTCGATTGAGCTTTTGCGTCAGTGTGGAATTGATTTTAAAAAAAATAGCGAGCAAGGAATTGACGTGAACCGATTCGGTGAGCTTCTTATGTCGTCAGGGATTGTGTTGAATGATAATGTTCATTGGGTTACTTTCCACAGTGGTTATGATTTTGGTTATCTGCTGAAGCTTTTGACGTGCAGAACTTTGCCGGATACACAAGCTGGATTTTTTGATTTGATCAAGATTTATTTCCCTGTGGTTTATGATATCAAGCATTTGATGAAATTCTGTAACAGTCTTCACGGTGGTTTGAACAAGCTTGCGGAATTGTTGGAAGTGGAAAGGATTGGTGTTTGCCATCAAGCTGGATCGGATAGTTTACTCACTGCGTGTACATTTAGGAAGTTGAGGGAAACATTCTTCAACGGCGAAACAGAGAAATATTCTGGTGTGTTGTATGGATTAGGTGTTGAGAAATCAGACTAA 840 0.3786 MSDVPKDVQKDLPKGDSIQIREVWNYNLEEEIALIREIVDEFNYVAMDTEFPGVVLRPVGNFKHINDFNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTESPCIWQFNFREFNISEDIFAADSIELLRQCGIDFKKNSEQGIDVNRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKLLTCRTLPDTQAGFFDLIKIYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRETFFNGETEKYSGVLYGLGVEKSD* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0687 279 Pfam CAF1 family ribonuclease 23 144 IPR006941 -
Tpr7g0687 279 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 12 278 IPR039637 GO:0004535|GO:0030014
Tpr7g0687 279 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED 12 278 - -
Tpr7g0687 279 SUPERFAMILY Ribonuclease H-like 20 273 IPR012337 -
Tpr7g0687 279 Gene3D - 8 277 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0687 Tpr-Chr7 6089748 6091508 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0687 K12581 - gmx:100785970 516.538