Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0665 ATGGGTACCCTTACACTGTCTCTTCTCAAATTCTACTCACCCTTTTCCTCCACGCTTTTCTCCCACTCAGCTCGACCCGTTTTCCCCCGCGCCGCCGTTTTCAGAAAAAATAAACTTCCTTCCTTTCGCGCCGTCTCATCATCCTCTCAGCCGTTAACGGCTGAGAAGAATTGCAACCACGGTGAAAATTTCCGTTCAAAGAGTTCATCTCCTGAAATATGGCTTCATAACACAATGAGTAAAACGAAAGAGCTTTTTAAACCCAAAGTTGAATCTAAAGTTGGAATGTATGTTTGTGGAGTCACTGCTTATGATCTTAGCCATATTGGTCATGCTCGTGTTTACGTCAATTTTGATCTTCTTTATAGATATTTTAAGCACTTGGGATTTGAAGTTTGTTATGTTCGCAATTTTACTGATGTAGATGATAAGATAATTGCTAGATCAACGGAGTTAGGAGAAGATCCAATTAGTTTGAGTCGACGCTATTGTGAAGAGTTCTGTCAAGACATGGTAACTCTTAATTGCTTGTCTCCTACCGAGGAACCAAAAGTCTCCGAGCACATGCCACAAATCATTGATATGATTGAGAAGATTCTTAATAATGGGTATGCATACAATGTTGATGGGGATGTATACTTTAATGTAGAAAAATTTCCAGAATATGGGAAATTATCTAGTCGAGGTCTAGACGACAATCGAGCTGGTGAGAGGGTTGCTGTTGATTCAAGGAAGAAAAATCCTGCTGATTTTGCTCTATGGAAGTCTACAAAGCCAGGGGAGCCATTTTGGGAAAGTCCCTGGGGTCCTGGACGACCTGGGTGGCATATTGAATGCAGTGCTATGAGTGCAGCTTATCTTGGTTACTCTTTTGACATCCATGGTGGAGGGATTGACCTTGTATTTCCTCACCATGAAAATGAAATTGCTCAGAGTTGTGCGGCTTGTAGTAAAAGTGATATTAGTGTATGGATGCACAATGGTTTTGTCAACATTGACTCTGTGAAGATGTCTAAATCTCTGGGAAACTTTTTCACAATACGGCAGGTTGTAGATGTTTACCATCCGCTGGCTTTGAGATATTTTTTGATGAGCGCCCATTATAGATCTCCTATGAACTACTCTAATATACACCTTGAAAGTGCTTCAGACCGTGTTTATTATATATATGAGACATTACATGAATGTGAAAGCTTGCTGAACCAGCATGATCAGACGGTTAGGAAGGACTCCGTCCCATCAGATACTTTGAGTATTATTGATAGTCTGTATGATGTTTTTCTGACCTCAATGTCTGATGATCTTCACACTCCAGTTGTATTGGCTGGACTGTCTGACCCACTTAAATCAGTGAACGACTTGCTGCATACTCGCAAGGGGAAAAAACAACAATTTCGAATAGAATCACTTGCAGCTTTGAAGAAAAGCATCGGAGATGTCCTTACAGTTTTAGGTCTTATGCCTTCAAGTTACTACGAGGTTTTGCAGCAGCTTAAGGAAAAAGCTCTTGCGCGTGCAAACTTGACAGAAGATGAAATCTTGAAGAAGATTGAAGAACGAGATGCTGCTAGAATACAAAAGGAGTATGCCAAATCTGATGCCATAAGGAAAGATTTGGCTGATGTTGGTATTGCTCTTATGGATAGTCCAAATGGCACAGCTTGGAGGCCTACCATTCCTATTCCGCTTCAAGAGCAGCTCTAG 1704 0.4102 MGTLTLSLLKFYSPFSSTLFSHSARPVFPRAAVFRKNKLPSFRAVSSSSQPLTAEKNCNHGENFRSKSSSPEIWLHNTMSKTKELFKPKVESKVGMYVCGVTAYDLSHIGHARVYVNFDLLYRYFKHLGFEVCYVRNFTDVDDKIIARSTELGEDPISLSRRYCEEFCQDMVTLNCLSPTEEPKVSEHMPQIIDMIEKILNNGYAYNVDGDVYFNVEKFPEYGKLSSRGLDDNRAGERVAVDSRKKNPADFALWKSTKPGEPFWESPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCAACSKSDISVWMHNGFVNIDSVKMSKSLGNFFTIRQVVDVYHPLALRYFLMSAHYRSPMNYSNIHLESASDRVYYIYETLHECESLLNQHDQTVRKDSVPSDTLSIIDSLYDVFLTSMSDDLHTPVVLAGLSDPLKSVNDLLHTRKGKKQQFRIESLAALKKSIGDVLTVLGLMPSSYYEVLQQLKEKALARANLTEDEILKKIEERDAARIQKEYAKSDAIRKDLADVGIALMDSPNGTAWRPTIPIPLQEQL* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0665 567 Hamap Cysteine--tRNA ligase [cysS]. 73 558 IPR015803 GO:0004817|GO:0005524|GO:0006423
Tpr7g0665 567 PANTHER CYSTEINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL 72 565 - -
Tpr7g0665 567 TIGRFAM cysS: cysteine--tRNA ligase 75 556 IPR015803 GO:0004817|GO:0005524|GO:0006423
Tpr7g0665 567 Coils Coil 492 512 - -
Tpr7g0665 567 Gene3D HUPs 56 374 IPR014729 -
Tpr7g0665 567 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 413 557 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Tpr7g0665 567 SUPERFAMILY Nucleotidylyl transferase 72 380 - -
Tpr7g0665 567 PANTHER CYSTEINYL-TRNA SYNTHETASE 72 565 IPR024909 -
Tpr7g0665 567 CDD CysRS_core 74 375 IPR032678 -
Tpr7g0665 567 Gene3D - 375 557 - -
Tpr7g0665 567 PRINTS Cysteinyl-tRNA synthetase signature 96 107 IPR024909 -
Tpr7g0665 567 PRINTS Cysteinyl-tRNA synthetase signature 132 141 IPR024909 -
Tpr7g0665 567 PRINTS Cysteinyl-tRNA synthetase signature 261 279 IPR024909 -
Tpr7g0665 567 PRINTS Cysteinyl-tRNA synthetase signature 292 313 IPR024909 -
Tpr7g0665 567 Pfam tRNA synthetases class I (C) catalytic domain 86 382 IPR032678 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0665 Tpr-Chr7 5861825 5867182 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0665 K01883 - gmx:100786700 986.867