Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0634 ATGGGCAGCTTGGATTTAGAAGGAAGTGAAAAGGACTATGTGCTTACTACTACTCAAGTGAGCATTGGTGGATTTGACACTGATGTCAAAGCTGATGAGTTGGTATCATTCTTGGAGTCAAAGATTGGATATGTAGACAGATGTCGGCTGAAGACTTCTTGCACTCCTCCAGAATCGTATCCAGAATTTACGATGATTGATACCAAACAGATTGAAAAAACGGATGACTATCAGAAGGTGGCGCCTCATGCCTTTGTGCATTTTACTTTGCCGGAATCTGCAACTGAGGCCATCAATGCTGCAGGTCGCTGTGACCTAATTTTGAATAATAAGGTATTAAAGGTCATCAGTGGGCCACAGAATCCTAATTTCCTGAACCAAAGGAGGCGAACGGAGGCTCCTTTTAAGATGTCGGATGTAATCGTTGAAATTGGGACTTTGGTTGGCCAAACGGATTTTAATGTTGCTTGGAGAGGACCTGCTAAAGGGGTAAACTTTCTAGTGGATCCTTTTGACAGCATGTGCAAGCTTTGTTTTAATCAGGATACTGCCTTCGAATTCAAAGGAATCGGTAAAAAAGTAGTGATAAAGTGTGATTTTAAGGTGGGCTTCTTGGTTAGAGACATAAATGAGATCGTAAGATATGACGATACATCTCATCTTGTTGTTTTATTACATCTAGCTTCATCACCTTTGGTTTGGTACAGAACTGCCGATGATGACATTGAAGAATCGGTCACTATTGATTTGTTGGACGACGATGATCCTTGGATTAGAACGACCGACTTTACCCCTAGTGGAGCCATTGGTCGATGCGGTTATTATAGAATTGCAATCCCACCTAGATATGGTGCAAAATTGAATAAGGCCTTGGAATATCTGAGATGCCAAAGAGTGCAAAGCATTCCGCTTAAGCGACCACTTAGGATACTAAATGAGCCTGATTTTGGGGTGCCCATGTCAGATGCTTTCTTCTACATAGGTTTTCAGAAGGACATTTCTTTTGATATAATGTTCTTGATTAACGCAATTGTACACAGAGGAATATTCAATCAGTATAATTTATCAAACAAGTTTTTTGAATTACTCAGAAATCAACCTAAGGATGTCAATGTAGCTGCCCTGAAGCACTTATGTACTTACAAGCGCCCAGTGTTTGATGCAGCTAAGAGGCTGGAAATGGTCCAAAGATGGTTGCTCAGAAATCCAAAACTTTATGAAATCTCCAAGCAGTCCGATGACATTATGGAGGTTAGAAGACTGGTTGTTACTCCAACAAAAGCCTATTGTATAGCACCAGAAGTTGAATTGTCTAATAGGGTCCTGAGAAGATTTAAAGAAGTTTCAGACCGATTCTTGAGAGTCACCTTTATGGATGAAGGAATGCAAACACTTAATACATATGCTCTTAACTATTATGTTGCTCCCATTGTGAAGGAAATCACATCAAACTCCTTTCCACAGAAGACAAGAATATATAAAAGAGTGAAGACAATCCTGGAAGATGGGTTTTACTTTTGTGGCCGAAAATATTCATTTTTAGCCTTTTCGTCCAATCAACTTAGAGATCGTTCTGCTTGGTTTTTTGCTGAAGAAAAGAACATCAGTTGTGATTTTATAAGAAATTGGATGGGTAAGTTTAATCAGAAAAATATCGCAAAGTGTGCAGCTAGGATGGGGCAATGCTTCTCATCCACATATGCATCGGTGGAAGTTCCTGCTAATGAAGTTAACTCGATGCTACCTGACGTGGAGAGGAATAATTATATTTTCTCTGACGGTATTGGTATTATCACTACTGATCTTGCAGTCGAAGTTGCTAAAAAATTGAAGTTGGACAAGGTACCCTCTGCTTACCAGATCAGGTATGCTGGTTTTAAAGGGGTTGTAGCCTCTTGGCCTGCTAAAGGGGATGGAATCAGACTTTCTTTGAGACCCAGCATGAACAAGTTTCAATCCAATCATACTACTTTGGAGATTTGCTCATGGACTAGGTTTCAACCTGGTTTTCTTAACAGGCAGATTATAACACTGCTTTCAGCTTTGGGTGTGCCTGATGAAATATTCTGGAAAATGCAGGAGGGGATGATTTCAGAATTAAATCAAATGCTTGTTGATGCAGAAGTGGCCTTTGATGTTCTTACCAAGTCTTGTGCTGAGCATGGAAATGCTGCAGCAATAATGTTAAGTTGTGGCTTCAGTCCGAAAACAGAACCTCATCTTAGAGGCATGCTAAATTCTATACGTGCTGCGCAGCTTTGGGGCCTTCGAGAAAAGTCTAGGATTTTTGTTTCATCTGGGAGATGGTTGATGGGTATCTTAGATGAGTTGGGTGTGCTTGAACAAGGGCAATGCTTTGTGCAAGTGTCTACTCCTTCTATTGAAAATTGTTTCTCAAAGCACGGCTCAAGATTTTCAGAGACAAAAACCTCGCATGTGGTAAAAGGTCTTGTGGTTATAGCTAAAAATCCATGTCTTCACCCTGGAGATGTGAGAATTTTGGAGGCAGTTGATGTCCCGGCTTTGCATCATTTATATGACTGTCTTGTTTTTCCTCAAAAGGGTGAAAGACCCCATGCAAATGAAGCTTCTGGAAGCGACCTTGATGGGGATCTGTATTTTGTCACATGGGATGGAAATCTCATTCCACCTAGTAAGAGGAGCTGGCCACCTATGGATTACACTGCTCAAGAAAGCCGTCTTCAAACACGGCAAGTCACTATACGGGACATCATAGATTTTTTTGTAAGAAACATGGTGAATGAGCATTTGGGCTCAATCTGCAATGCACATGTGGTACATGCGGATTCCAGTGGCTATGGCGCCTTAGATGAAAAATGCATCCACTTGGCTGAGTTAGCAGCCACTGCTGTTGATTTCCCCAAGACCGGAAAGCTTGTCACAATGCCCCCTAATTTGAAGCCCAAACTGTACCCTGATTTTATGGGGAAAGAGCACCATCAGTCGTACATGTCAAAGAAAATCCTCGGTAGGCTTTACCGACAGATCAAAGATGCTTACTATAAAGATATTGATGCTCCTGAATTGAACTGTGAATCTGGTGATATACATTATGATGCAGATCTCGAGGTTCCGGGATCTGCTGAATTTATTGCTGATGCATGGGAGCAAAAGTGCTCTTATGATGGCCAGTTAACTGGATTATTAGGCCAGTATAAAGTCAAAACAGAGGAAGAGGTTGTCACTGGACAGATCTGGTCCATGCCAAGATACAACAGCAGAAAGCAAGGGGAACTTAAGGAGAGGCTGAAGCACTCATACAGTTCCCTCAAAAAAGAATTTAGGCATAGTTTTGACAAACTGAATTCCGATGTTGGAGACGTAAGTGATGAAGAAAAAAATTTGTTGTATGAAAGGAAAGCTTCTGCTTGGTACCAGGTGACATATCACCCTAAATGGTTGAAACAGTCTCTCGATATGCAAATTAAATCATCGGATAACCAAGAGGCAGATAGTTCTGGGAATATATTGATGTTGAGTTTTCCCTGGATTGCTGTTGATTACCTGGCACGCATAAAGATAAGGAATCGGAAAGTTGGAAATTTTGATTCAACTAAGGCAGTGGATTCTCTGGCGAAATATCTATCCGAAAGGTTATAG 3621 0.4098 MGSLDLEGSEKDYVLTTTQVSIGGFDTDVKADELVSFLESKIGYVDRCRLKTSCTPPESYPEFTMIDTKQIEKTDDYQKVAPHAFVHFTLPESATEAINAAGRCDLILNNKVLKVISGPQNPNFLNQRRRTEAPFKMSDVIVEIGTLVGQTDFNVAWRGPAKGVNFLVDPFDSMCKLCFNQDTAFEFKGIGKKVVIKCDFKVGFLVRDINEIVRYDDTSHLVVLLHLASSPLVWYRTADDDIEESVTIDLLDDDDPWIRTTDFTPSGAIGRCGYYRIAIPPRYGAKLNKALEYLRCQRVQSIPLKRPLRILNEPDFGVPMSDAFFYIGFQKDISFDIMFLINAIVHRGIFNQYNLSNKFFELLRNQPKDVNVAALKHLCTYKRPVFDAAKRLEMVQRWLLRNPKLYEISKQSDDIMEVRRLVVTPTKAYCIAPEVELSNRVLRRFKEVSDRFLRVTFMDEGMQTLNTYALNYYVAPIVKEITSNSFPQKTRIYKRVKTILEDGFYFCGRKYSFLAFSSNQLRDRSAWFFAEEKNISCDFIRNWMGKFNQKNIAKCAARMGQCFSSTYASVEVPANEVNSMLPDVERNNYIFSDGIGIITTDLAVEVAKKLKLDKVPSAYQIRYAGFKGVVASWPAKGDGIRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLSALGVPDEIFWKMQEGMISELNQMLVDAEVAFDVLTKSCAEHGNAAAIMLSCGFSPKTEPHLRGMLNSIRAAQLWGLREKSRIFVSSGRWLMGILDELGVLEQGQCFVQVSTPSIENCFSKHGSRFSETKTSHVVKGLVVIAKNPCLHPGDVRILEAVDVPALHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDGNLIPPSKRSWPPMDYTAQESRLQTRQVTIRDIIDFFVRNMVNEHLGSICNAHVVHADSSGYGALDEKCIHLAELAATAVDFPKTGKLVTMPPNLKPKLYPDFMGKEHHQSYMSKKILGRLYRQIKDAYYKDIDAPELNCESGDIHYDADLEVPGSAEFIADAWEQKCSYDGQLTGLLGQYKVKTEEEVVTGQIWSMPRYNSRKQGELKERLKHSYSSLKKEFRHSFDKLNSDVGDVSDEEKNLLYERKASAWYQVTYHPKWLKQSLDMQIKSSDNQEADSSGNILMLSFPWIAVDYLARIKIRNRKVGNFDSTKAVDSLAKYLSERL* 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0634 1206 PANTHER RNA-DEPENDENT RNA POLYMERASE 15 1205 IPR007855 GO:0003968
Tpr7g0634 1206 PANTHER RNA-DEPENDENT RNA POLYMERASE 6 15 1205 - -
Tpr7g0634 1206 Pfam RNA dependent RNA polymerase 423 1003 IPR007855 GO:0003968
Tpr7g0634 1206 SUPERFAMILY RNA-binding domain, RBD 14 122 IPR035979 GO:0003676
Tpr7g0634 1206 CDD RRM_SF 20 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0634 Tpr-Chr7 5599303 5604728 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0634 K11699 - gmx:100795178 2032.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0634 7 5599303 5604728 Tpr7g0634 7 5599303 5604728 ECH