Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0628 ATGAAGCTATATACATTTGTAATAATTTCAACTTTATTGCTCATACAATTGAGCCTAATTCTTGCAGATGTTGGTACTGCTTCTTCTTATGGACCTCCATATATACCTACTGCTTGTGATGGAAATAGGAGGGAACAGTTTCCTCCAGGAAATATATTTGTGGCAGTAAATGAAGGGTTATGGGATAATGGTGCAGCATGTGGAAGAAGATACAGAGTAAGGTGTGTGAGTGGAATCAATAAGCCATGCAAAGGTGGTACTAGTATTGATGTTAAAGTTGTTGATTCTATTGCTTGTACTAAATCATCTTCATGCCCTCATACTTTTCACATGTCAACTGAAGCCTTTTCTGCTATCTCTCGTTTCCCTCATGCAAATATCAATATTGAATATATCCAGATATGA 405 0.3654 MKLYTFVIISTLLLIQLSLILADVGTASSYGPPYIPTACDGNRREQFPPGNIFVAVNEGLWDNGAACGRRYRVRCVSGINKPCKGGTSIDVKVVDSIACTKSSSCPHTFHMSTEAFSAISRFPHANINIEYIQI* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0628 134 Gene3D - 23 134 IPR036908 -
Tpr7g0628 134 SUPERFAMILY Barwin-like endoglucanases 12 131 IPR036908 -
Tpr7g0628 134 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 25 134 IPR007112 -
Tpr7g0628 134 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 2 133 - -
Tpr7g0628 134 PANTHER RLPA-LIKE PROTEIN, DOUBLE-PSI BETA-BARREL-RELATED 2 133 - -
Tpr7g0628 134 Pfam Lytic transglycolase 55 131 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0628 Tpr-Chr7 5555718 5556706 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0628 - - mtr:MTR_3g107500 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0628 7 5555718 5556706 Tpr7g0628 7 5555718 5556706 ECH