Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0615 ATGAGCAGACCAGGTGATTGGAACTGCAGGACATGCAACCATCTCAACTTCCAGAGAAGAGAATCTTGCCAGCGATGTGGAGAATCAAGATTGATTTCTGGCGGTGCTGATTTTGGCGCCGCCTTTATTGGTGGAAGAGGCTCTACTTCGCCTTTTCCTTTTACCACCGGTCCTGATGTCCGCCCTGGTGATTGGTATTGTACGGTTGGAAATTGTGGAGCTCACAATTTCGCTAGCCGGTCAAGTTGCTTCAAATGTGGTGCACCTAAGGATATTGACACTTTCTCCTCTGACTCCTCCGACATGCCACGGTTATTGAGGTCACCATACGGTTTTGGAGGTGGTAGTAGCGGCACCTCTACCCGCCCTGGCTGGAAATCCGGCGATTGGATATGTACCAGGTCCGGGTGTAACGAGCATAACTTCGCAAATAGAATGGAGTGTTACCGATGCAATGGCCCGAGGGACTCTAGTACCGGAAGATCTTCCTATTTATCTTGA 501 0.499 MSRPGDWNCRTCNHLNFQRRESCQRCGESRLISGGADFGAAFIGGRGSTSPFPFTTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKDIDTFSSDSSDMPRLLRSPYGFGGGSSGTSTRPGWKSGDWICTRSGCNEHNFANRMECYRCNGPRDSSTGRSSYLS* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0615 166 SUPERFAMILY Ran binding protein zinc finger-like 2 31 IPR036443 -
Tpr7g0615 166 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Tpr7g0615 166 ProSiteProfiles Zinc finger RanBP2 type profile. 126 157 IPR001876 -
Tpr7g0615 166 ProSiteProfiles Zinc finger RanBP2 type profile. 61 92 IPR001876 -
Tpr7g0615 166 PANTHER RAN BP2/NZF ZINC FINGER-LIKE SUPERFAMILY PROTEIN 1 160 - -
Tpr7g0615 166 PANTHER ZINC FINGER PROTEIN 1 160 - -
Tpr7g0615 166 Pfam Zn-finger in Ran binding protein and others 61 90 IPR001876 -
Tpr7g0615 166 Pfam Zn-finger in Ran binding protein and others 3 27 IPR001876 -
Tpr7g0615 166 Pfam Zn-finger in Ran binding protein and others 126 155 IPR001876 -
Tpr7g0615 166 Gene3D - 119 157 - -
Tpr7g0615 166 Gene3D - 2 31 - -
Tpr7g0615 166 Gene3D - 56 92 - -
Tpr7g0615 166 ProSitePatterns Zinc finger RanBP2-type signature. 130 151 IPR001876 -
Tpr7g0615 166 SMART zf_4 63 89 IPR001876 -
Tpr7g0615 166 SMART zf_4 5 29 IPR001876 -
Tpr7g0615 166 SMART zf_4 128 154 IPR001876 -
Tpr7g0615 166 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Tpr7g0615 166 ProSitePatterns Zinc finger RanBP2-type signature. 65 86 IPR001876 -
Tpr7g0615 166 SUPERFAMILY Ran binding protein zinc finger-like 57 93 IPR036443 -
Tpr7g0615 166 SUPERFAMILY Ran binding protein zinc finger-like 120 158 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0615 Tpr-Chr7 5318153 5319429 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0615 - - mtr:MTR_3g107610 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0615 7 5318153 5319429 Tpr7g0615 7 5318153 5319429 ECH
Tpr4g3694 4 42850571 42851994 Tpr7g0615 7 5318153 5319429 ECH