Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0599 ATGGTTGGAGCAATGATATCCAAGTCTCAATATCTTTTCTTCCAATTCCTAATCATCATCCTCCTCTCAACACTGTTCATCCACTTCTCTCAAGCTGACGTTGGCACTGCTTCCCATTATGGCCCTCCCTTTTTACCGACGGCGTGTTTTGGGGGAGATGCATCACAATTTCCGTCGAGCAACATGTTTGGTTCAGCAGGAGAAGGTATATGGGACAATGGTGCAGCATGTGGGAGGCTATATGAGGTGAGATGTATAAGTGCAGCTGTACCTAGAACTTGCATTCCAGGTCAAACAATTCAGATTAAGATTGTTGATAGGGCACAATCCTCTGTTTCTAGGCCTTCTTCAAGTGATACTTCTATGGTCCTCTCCACTACTGCCTTTCAGATCATTGCAAATGTTTCTGCATCTTTGATTAACATTGAATTCCAGCAGGTTTGA 444 0.4369 MVGAMISKSQYLFFQFLIIILLSTLFIHFSQADVGTASHYGPPFLPTACFGGDASQFPSSNMFGSAGEGIWDNGAACGRLYEVRCISAAVPRTCIPGQTIQIKIVDRAQSSVSRPSSSDTSMVLSTTAFQIIANVSASLINIEFQQV* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0599 147 Pfam Lytic transglycolase 70 143 IPR009009 -
Tpr7g0599 147 Gene3D - 30 147 IPR036908 -
Tpr7g0599 147 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 10 147 - -
Tpr7g0599 147 SUPERFAMILY Barwin-like endoglucanases 20 147 IPR036908 -
Tpr7g0599 147 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 10 147 - -
Tpr7g0599 147 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 147 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0599 Tpr-Chr7 5166075 5172330 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0599 - - gmx:100803494 218.779