Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0565 ATGTTGAAGCAATTCCTAAGTAAACTTCCTCGCAAAGCGTCAAAATCTGACTCCGACGAGTCACCCCGAGGCGACTCGTCTGGCTCGCCTCGAGCCGCCGGAAAAAACAGCAGGTCACACGGCGGAAATGAAGGTGGTAAAACCAGCGCCGGTAAAAGGAACTCCTCGGCGGCAGTTTTTCCGACGGGGACCGTTTCGTTGATTGAACCGTTGGTGCCGTTTAAGGATGTTTCTAGCTCGGAAAAAATGAACCTTTTTGTGAGCAAATTGAGTCTTTGTTGTGTGGCGTTTGATTTCACCGATCCTGCTAAGAACGTTGTGGAAAAAGATGTAAAGAGAAGAACTTTGGTTGAACTTGTTGATTTTGTTTCATCTTTTGGTTCATCAAAGTTTAGTGAACCAGCTATTCTTGCAATGTGTAGAATGTGTGCTATTAATCTCTTTCGCGTTTTCCCGCCAAATTATAGGGCTAATAATCGAGGTGGTGGCGGTGAGAATGACGATGATGAACCGTCTTTTGATCCAGCTTGGCCTCATCTTCATCTTGTTTATGAATTATTGCTTAAATTTATAACATCATCTTGTCTTGATGCTAAGGTTGCAAAAAAGTATTTTGACCATTCATTTATTTTGGCATTGTTGGAGTTGTTTGATTCGGAGGATCCTAGGGAAAGAGATTGTTTGAAGACAATTCTGCATAGGGTTTATGGAAAATTCATGGTTCATAGACCTTTTATTCGGAAATCGATTAACAACGTGTTTTATAAGTTTGTGTTTGAGACTCAGAAACATAATGGGATTGCTGAGTTGTTGGAGATTTTTGGGAGTGTAATAAGTGGTTTTGCTTTGCCATTGAAAGAGGAACACAAAATTTTCTTGTGGAGAGTTTTGATTCCTTTGCATAAGCCTAGATCTATGGGGGTTTACTTTCAACAACTGTCTTATTGTGTTACACAGTTTATAGAGAAAGAGCCGAAGTTGGCTAGCGTTGTGATAAGGGGTTTGTTGAAATATTGGCCAATAACACATAGTCAGAAAGAGGTAATGTTCCTTGGAGAATTGGAAGAAATTTTGGAAACAATTAACATGGTAGAGTTCCAAAAGGTCATGGTACCATTGTTTTGGCGAATTGGATATTGCATTAGCAGTTTACACTTTCAGGTATCTGAAAGAGCCCTTTACTTGTGGAACAATGACCACATTGTCAATTTGATTGCTCACAACCGTCAGGTGCTACTACCTATCATATTTCCAGCTCTGGAGAGGAATGCTCAAAGCCACTGGAATCCGGCAGTGCTCAACTTAACTCATAATGTTAGAAAGATGTTCGTGGAGATGGATGAGAAACTCTTCCTTTCTTGTCAATCTCAGTATAAGGAGGATGAAGCAATGCTAAACTTGGAATCCGAGAAACGAAAAGAAGCTTGGAAACAATTAGAACATACAGCCAGTCTCAAACCTGTAGTCGGAAACACCGCTGTTTTAGTGTCTCCGATATGA 1500 0.406 MLKQFLSKLPRKASKSDSDESPRGDSSGSPRAAGKNSRSHGGNEGGKTSAGKRNSSAAVFPTGTVSLIEPLVPFKDVSSSEKMNLFVSKLSLCCVAFDFTDPAKNVVEKDVKRRTLVELVDFVSSFGSSKFSEPAILAMCRMCAINLFRVFPPNYRANNRGGGGENDDDEPSFDPAWPHLHLVYELLLKFITSSCLDAKVAKKYFDHSFILALLELFDSEDPRERDCLKTILHRVYGKFMVHRPFIRKSINNVFYKFVFETQKHNGIAELLEIFGSVISGFALPLKEEHKIFLWRVLIPLHKPRSMGVYFQQLSYCVTQFIEKEPKLASVVIRGLLKYWPITHSQKEVMFLGELEEILETINMVEFQKVMVPLFWRIGYCISSLHFQVSERALYLWNNDHIVNLIAHNRQVLLPIIFPALERNAQSHWNPAVLNLTHNVRKMFVEMDEKLFLSCQSQYKEDEAMLNLESEKRKEAWKQLEHTASLKPVVGNTAVLVSPI* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0565 499 PIRSF PP2A_B56 4 496 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tpr7g0565 499 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 73 483 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tpr7g0565 499 Gene3D - 79 482 IPR011989 -
Tpr7g0565 499 MobiDBLite consensus disorder prediction 10 24 - -
Tpr7g0565 499 MobiDBLite consensus disorder prediction 1 55 - -
Tpr7g0565 499 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 497 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tpr7g0565 499 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 497 - -
Tpr7g0565 499 SUPERFAMILY ARM repeat 84 479 IPR016024 -
Tpr7g0565 499 MobiDBLite consensus disorder prediction 30 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0565 Tpr-Chr7 4742778 4746001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0565 K11584 - gmx:100808283 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0565 7 4742778 4746001 Tpr7g0565 7 4742778 4746001 ECH