Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0562 ATGCTAATGGTTGGAATGTCGAATAATTTTGTTTCCGAGTCAGTAACCAGCCGGCAGATGGCTCAATTGGAACCTATTATGAACAAGGTTGATTCGTCGGGACTTGTGCGTCCTGTATCAAGTGATTCTGTGCAGGGGACCTCGAACGGTGAACCAACGCCTCAAGGGTTACCGCTTTCTAATCGGCAGATTACAATGTTGAATAATTTAGGGTCAAATCATCTGTCAGCAGCTCCTAAGCGGAAGGCAACGATTGAACTGCCTTCGGGGAGCTTCATAACACCTAGCAAGCGGGAGAAACCAATGACAAATAGACCTTGGATGCAGCAAGGATCAAACAAAGGTTCCCAACAGATCCAGTCTCCATCAAATGCTTCTAGGATGCAGCATTCAGCATCATTTAGTAAGAGAAAAACACAAACGGATTCCGCCTCCAGCAAATCTGGGACGCCTCGGTCCTCAAATTCTAAAAATCAGATTGCACAGATGAAAGAATCCTCCAAGGTTCAATCTGAATCATCTAAGATTGTTAGGTCCAAGATGAGAGAATCATTAGCTTCTGCTCTGGCGTTGGTATCCCAGCAAGATAAACCTTTAGTCTCAAACAATGACAAACCAAATGATACTGCCAATAGCTCTCAATGTGCTGGATCAGCATCTGTGTCCGCTGACACTGCTGTGGAGCAACGGCAGGAAATTTGTCAATCTGTTAATTCCTCTTTAGCTGCGGCTGATTCCATTGACCATGTGATAGGAGAGCACATGAATAGTACATCTATTGAAGATTTTTCTGAAAAACCTAAGGACTTTGGAGCGGGATTCACAAACGTGGCAAACAATGAAGATATGCTGATTTCTGATAAGCAAGATTTCCAGTCTAACTACACTTTGACTACTGATGATGTTCCTTTCAGCGACACTTTCTTTGTGAAAGATGAACTTTTGCAGGGAAATGGTCTTTCCTGGGTATTTCCTGATATCGACCATATGATGGACATGGATGATCAAAGGGAAAGTCAAAATATGTTAGAGAAGAAATTGGAACCTGAGGAAACCGGTGGAGTTTGTAGTGAGGTGGTCCCTTTACCTGAACTTTTAGCATCAAGGATAGAAGAAGAGCTCTTCAAACTGTTTGGAGGCGTGAATAAGAAATACAAAGAGAAGGGAAGGTCTCTTTTGTTCAACTTGAAAGATCGCAATAATCCTGAACTTAGAGAAAGGGTTATGTTTGGTAAAATTCCTCCAGAACAATTATGTTCCATGACTGCCGAGGAACTTGCTTCGAAGGAGCTTTCTGAGTGGCGGATAGCCAAGGCTGAGGAGTTTGATAAAATGGTGGTTTTACCCGATTCGGATGTTGATATCAGACGTTTAGTCAGGAAAACACATAAAGGTGAATTTCAAGTGGAAGTTGAACATGAAGACAATGTTCCAGTGGAAGAGGTGTCCGGTGGCAAAAATTCTGTTGTTCGAAGCCGACCAGTTGAAAAGGGCGTGGGTGCCACTTCTCCTTCTAAACCTGGTGTAATCAAAAGCGATGTGAACACTGGCAATGAAAAGAGAAACTTACAGACGGATAATCAATTTTCCATCACCATTTCTTCCAATGATGGGACTGATCCAATGCAAGGGCTTATGACTGATGATGCATTGAAGGTCCCTGACTTTCTTCCAGAAACTTTTGATGAATTCATGGAAGCCCTTGATTCTGAGCCACCATTTGAAAATTTACCTCTAGAGTCTGGAAAAGTACCTAGCTCAGACAAGGATGTTTCCGGGGTTGGATCAAAATCAAAATCTTCTGATTTAACTTTAAGTGAGCAAGATGATGTCAGTGCTAATAAGTCTGATAAGCTTCAAAGCACAGATGTGGAGGAAGAAAAAAAAGTTAACACGGAAGCAGGGTCCGTTTCGTCTGATGCAAAATACAGTGAAAGTCGACGCGACACAAAGCCGACTGACGGACATACCAAGGAAATATCAACTGATGGCAAGAAGCCAACTTCCAATTTGTTGAAAACTACACCCATTAAGGGTGAATGCCTCTGGGAGGGAATGCTTCAGCCAAACATCTCAACCACTGATTCAGTCATTAGCATCTTCAAAAGTGGTGAGAAAACTTCTACCAAAGACTGGCCTGGATTTCTCGAGATCAAGGGAAGGGTTCGACTGGATGCATTTGAAAAATTTCTGCTAGAGCTTCCACAGTCAAGAACTCGTGCCATAATGGTTTCACATTTTATTTCCAAAGGCTCCACCCCTGAGGAGCAAGCAACTCTCCGTGAGGTGGCTGACTCATATATTTTGGACGAAAGAGTGGGATTTGGGGAACCTGTGCATGGAGTTGAACTTTACTTTTGCCCACCACATAAGAAAACAGTTGAAATGCTCAGCAAGATACTTCCAAAGGAACAAATTGAGGCAGTTAATACTATTGATAATGGTCTAATTGGTGTTATTGTATGGAGAAAAACTAATATAACTACATCTATATCTCCCACCACGCAATCACACAACAAACATAGCTCTAAAAGGCAAAACTTTAGTAGAAGACACCAAGATACTAATGTGAATGTCAATTCTACCCATAATGCAGTACCCTCTTCGGGGTTTAAGACAACCGTGAGTGAACCTCCGGGTGGTGATGATGACGATGACGAAGTTCCTCCTGGATTCGGGCCACCGGTTGCCCGGGTCGAGGATGACCTCCCGGAGTATAATTTTTCCGGTAGTTCAAATCCATCATCACACTTGGTTCAAAAACCTATGAGACCAGTTATGGTCCCATCTCACTCGGTTGGCCAAACCCCTTCACGTCCTGCACAACAAATGAGAGAACTTGTACACAAATATGGGCAAAACAAAACAACTGTATCTTCAGTAAACTGGCAGGACAAATTTGGTGGGTCAATTCAGCCCTGGAATGATGACGATGATGATATACCTGAATGGCAACCTCAAATCAACAACCAGAATCAGTTTCCTACCCAACAAACTATGCATAATTTTCATCTTAGACCTCACACTGTGAATCAATCATTTGCGGGTTTACCCCAGCAACAAATTATGCCGACACAATATCTGCAACCCACTATGAATGTAACACATGTACAACGAAACTTTGGCCCTCAGTGGGTTCCTCCAATCCAGGGTAACAATATACAACCAAATGGTGCACAACCCTATGGAACACCTACACAAGGAACACCATGGTCTAGAAGTAGAGGACTTTAG 3234 0.4276 MLMVGMSNNFVSESVTSRQMAQLEPIMNKVDSSGLVRPVSSDSVQGTSNGEPTPQGLPLSNRQITMLNNLGSNHLSAAPKRKATIELPSGSFITPSKREKPMTNRPWMQQGSNKGSQQIQSPSNASRMQHSASFSKRKTQTDSASSKSGTPRSSNSKNQIAQMKESSKVQSESSKIVRSKMRESLASALALVSQQDKPLVSNNDKPNDTANSSQCAGSASVSADTAVEQRQEICQSVNSSLAAADSIDHVIGEHMNSTSIEDFSEKPKDFGAGFTNVANNEDMLISDKQDFQSNYTLTTDDVPFSDTFFVKDELLQGNGLSWVFPDIDHMMDMDDQRESQNMLEKKLEPEETGGVCSEVVPLPELLASRIEEELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIPPEQLCSMTAEELASKELSEWRIAKAEEFDKMVVLPDSDVDIRRLVRKTHKGEFQVEVEHEDNVPVEEVSGGKNSVVRSRPVEKGVGATSPSKPGVIKSDVNTGNEKRNLQTDNQFSITISSNDGTDPMQGLMTDDALKVPDFLPETFDEFMEALDSEPPFENLPLESGKVPSSDKDVSGVGSKSKSSDLTLSEQDDVSANKSDKLQSTDVEEEKKVNTEAGSVSSDAKYSESRRDTKPTDGHTKEISTDGKKPTSNLLKTTPIKGECLWEGMLQPNISTTDSVISIFKSGEKTSTKDWPGFLEIKGRVRLDAFEKFLLELPQSRTRAIMVSHFISKGSTPEEQATLREVADSYILDERVGFGEPVHGVELYFCPPHKKTVEMLSKILPKEQIEAVNTIDNGLIGVIVWRKTNITTSISPTTQSHNKHSSKRQNFSRRHQDTNVNVNSTHNAVPSSGFKTTVSEPPGGDDDDDEVPPGFGPPVARVEDDLPEYNFSGSSNPSSHLVQKPMRPVMVPSHSVGQTPSRPAQQMRELVHKYGQNKTTVSSVNWQDKFGGSIQPWNDDDDDIPEWQPQINNQNQFPTQQTMHNFHLRPHTVNQSFAGLPQQQIMPTQYLQPTMNVTHVQRNFGPQWVPPIQGNNIQPNGAQPYGTPTQGTPWSRSRGL* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0562 1077 Gene3D - 332 429 IPR036575 GO:0006351
Tpr7g0562 1077 SMART mid_6 334 437 IPR003618 GO:0006351
Tpr7g0562 1077 ProSiteProfiles TFIIS central domain profile. 335 454 IPR003618 GO:0006351
Tpr7g0562 1077 MobiDBLite consensus disorder prediction 39 60 - -
Tpr7g0562 1077 Pfam SPOC domain 680 822 IPR012921 -
Tpr7g0562 1077 PANTHER SPOC DOMAIN / TRANSCRIPTION ELONGATION FACTOR S-II PROTEIN 32 1066 - -
Tpr7g0562 1077 PANTHER TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN 32 1066 - -
Tpr7g0562 1077 MobiDBLite consensus disorder prediction 103 174 - -
Tpr7g0562 1077 MobiDBLite consensus disorder prediction 496 527 - -
Tpr7g0562 1077 MobiDBLite consensus disorder prediction 1054 1077 - -
Tpr7g0562 1077 MobiDBLite consensus disorder prediction 611 633 - -
Tpr7g0562 1077 MobiDBLite consensus disorder prediction 575 673 - -
Tpr7g0562 1077 MobiDBLite consensus disorder prediction 831 885 - -
Tpr7g0562 1077 SUPERFAMILY Elongation factor TFIIS domain 2 359 430 IPR036575 GO:0006351
Tpr7g0562 1077 MobiDBLite consensus disorder prediction 508 527 - -
Tpr7g0562 1077 MobiDBLite consensus disorder prediction 82 180 - -
Tpr7g0562 1077 Pfam Transcription factor S-II (TFIIS), central domain 342 441 IPR003618 GO:0006351
Tpr7g0562 1077 MobiDBLite consensus disorder prediction 193 217 - -
Tpr7g0562 1077 MobiDBLite consensus disorder prediction 591 610 - -
Tpr7g0562 1077 MobiDBLite consensus disorder prediction 852 875 - -
Tpr7g0562 1077 MobiDBLite consensus disorder prediction 642 663 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0562 - - gmx:100808809 1381.31