Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0525 ATGAGTAGGCCAACGACCCGGAGTAAAAATAAAAGACAAAAACAAGGGGATGAAGGTGTCTGTTCTAATGAAATATGGAGGAGAATTCACGAAACAGGTGTGGTGACCGGGGATGATATTAATCAATTGTATATGATTTGGAAACCGGTTTGTTCAGGCTGCCGTGTGAATACGAAAGATAATCCGAATTGCTTTTGTGCATTGGTTCCACCTCCAAATGGAGCCAGAAAATCTGGCTTATGGGAGAAGATGTCAGATTTTGTAGAAAGTCTTGGCCCTGATCCAAACAAGGATCTTCGTGCGTCTGCCGATTCTCCTGCAGGTCTAACAAATCTTGGGGCAACATGTTATGCAAACGGAATACTCCAATGTTTGTACATGAACAAGTTATTCCGAGAAGGCATATTTTCTGCAGAACCAGATGTTTTAAGGCAACAACCTGTATTAGATCAACTAGCTAGACTTTTTGCGCAGTTACAAGCTAGTAAATTGGCTTTCATAGATTCATCTCCCTTTGTGAAAACACTGGAGTTAGATAATGGTGTTCAGCAGGATAGCCATGAATTCTTGACATTGCTTCTGTCATTGCTTGAGCGTTGTCTGAGTCATTCCAAAGTTTCCAAGGCAAGAACAATAGTTCAAGATCTTTTCCGTGGAAGTGTGTCTCATGTGACAACGTGCTCACAATGTGGAAGAGACTCTGAAGCTTCTTCCAAAACGGAAGATTTCTATGAATTGGAGTTGAATGTCAAGGGATTGAAAAGTTTAGATGAGAGCTTAGATGATTACCTAACTGTTGAAGAGCTTCATGGAGACAATCAATATTTTTGTGAGTCATGCAACACAAGAGTTGATGCTACTCGCAGCATCAAGTTGTGTACATTACCTGATGTACTTAATTTTCAACTTAAACGTTGTGTCTTTCTTCCAAAGACCACCACAAAGAAGAAAATTACCTCTGCATTTTCATTTCCTGCACAACTTGATATGCGACATAGATTGTCTGAGTTGTCTCAGTTTGATTTGGTATATGACTTGTCAGCTGTACTGATTCACAAGGGATCTGGTGTTAATAGCGGCCATTACATCGCTCACATCAAGGACAAAAACACGGGGCAGTGGTGGGAATTTGATGATGAACTTGTTACTAATTTGGGTAACCATCCATTTGGTGAAGGACCTTCTAGTTCTACTATTAAATCCATTGTAACTGATGCAATTCAATCTGAAGTAAAGATAGCTGAAAGTAATGGAAACAAAACTCATTCACAATCTTCGCTTATGGAGATATTTTCTTCTTGTGATGCATATATGTTGATGTACCATCTTAAGCATGCAAAAAATGTAAGTGAAAATGGGGGCATAGCTTGTGGTGCTAACCATAAAGAAATAGAGGGTGTTGTAGCTACTGCACGAGATGGTACTTCTCTTCCTTCTCATCTTTATGATGAGATTCACAATCTCAATGCCTCATATCTTGATGCTTGTCAACAATACAGTCATCGGAAAGAGTTAGAATTGAGTCGTATTACTGATAGGAGAAAGGAAGTTCGATCTGTTTTAGCTGAAGCTTCTGTTCCACCATTGGAGAGACCATTCTATTGGATTTCTAGTGACTGGCTTCGTCAGTGGGCTGACAACATTATTCCAACTTCGATTGACAACACATTCATCCAATGTTCACATGGGAAAGTCCCCGTTTCAAAGGTTACCTCAATAAAGCGACTGTCTGCCAAAGCCTGGGATAAGTTGTTTTCCAAGTATGGTGGGATGCCAACACTGTCTCATGATGACCATTGTCGGGATTGTCTGATACACGGGGCTCAGACAGTGGTATCAGCTGACACCTATCGGGGTAGAAGAGAATCATTGAAGCCACTTGCACGTGATATTCTTGACGGGAACTGTCTAGACGGAAAGTATTTCATATCCAGACCATGGTTGCTGCAGTGGTGGAAAAGAAAAGTCCTTGATGCTCCATCTGAAGCTGATGCTGGACTAACGGCAGCAATTAGTTGTCCACACGGTCTATTGATGCCTGAGCAAGCTCCTGGTGCTAAGCGGGTGCTTATTCCTGAGACTTTTTGGCTCTTCTTATATGAAGATGCTATTTCTGTAAAACCCGATGATCCCTTAGGTGGCCCAACTCTTCCTTTAAGTTCCATAGAGTGTTCCCAATGCATTAATGAATTATCTGAAGCAGCATGCTTGGAGGACTCCTTGAGATTAGTTAAACAAAAGCAGCGTCAGAATCATGAGAAATTATTCCAGGCTAAAAGTATGCCACTATCTGTAGATTGCAAATATTTCTTGCTGCCTTCTTCATGGATATTAAAATGGAGAAATTACATTAGTCCAACATTCAAGAATCCAGATAAACCGGAAACTTTAGATGGGGTAATTGATTCACTGATGTGTGAAAAGCACTCACAACTTGTTGAAAGACCTCCTCAACTGGTTTTCAGACGCGGTGCTATAAACCAGAGAGAATCTTCTGCAGGTTTAACTATCATATCTGAGAATGATTGGATATGCTTTTGTGAAGAATGGGGTGGTACTGTGACCAAAGGGATATCTGCTACAATTTATCACATTAATGATTCAGATAACTTTTTGACTGGATCCGATGACAAGATGCTGATATGTGAGGATCAGTTACACACGGGGGATAAAGTGAATAATGAAAATGGAACTGGACAAATTTTGATCAAGACTTGTCCTGAGGTTTGTGAAAGTTGCATTGGAGAAAAAGAAAGCTGTGACTTAATGCATAAACTTAACTATTGCAATGAGGACATATCTGTAATTCTTGTACGTGGTAAGGAGGTACCTAAATCAATCTTGGAGGCGTCAAAGGGATTAATTGAAACCGATCGGCGGGTTTCGAAGCGCTCCCGGAAGACTAAAAATGGGAGTTCAGTTAGTCTAAAAGTTTCCGCTTCAACATCACTATACCAGTTGAAAATGATGATATGGGAATCCTTTGGGGTTGTCAAGGAAAACCAGATACTACATAAAGGTGATAGAATAATTGACAATGATGATGAAAGTGCTACCCTTGCGGATGCAAACATATTTGCCGGAGATCAGATTATAGTGAGGGATTCTGAGATCCATGAAAATCGAGATATTGCCGATGAACTCTGCAGTGATAGGATGGATCTGCAGCATACTGAGGAAGGTTTCCGTGGAACGCTTCTTACAACAAACATTTCATCCCAGGTTGTTTAA 3231 0.4051 MSRPTTRSKNKRQKQGDEGVCSNEIWRRIHETGVVTGDDINQLYMIWKPVCSGCRVNTKDNPNCFCALVPPPNGARKSGLWEKMSDFVESLGPDPNKDLRASADSPAGLTNLGATCYANGILQCLYMNKLFREGIFSAEPDVLRQQPVLDQLARLFAQLQASKLAFIDSSPFVKTLELDNGVQQDSHEFLTLLLSLLERCLSHSKVSKARTIVQDLFRGSVSHVTTCSQCGRDSEASSKTEDFYELELNVKGLKSLDESLDDYLTVEELHGDNQYFCESCNTRVDATRSIKLCTLPDVLNFQLKRCVFLPKTTTKKKITSAFSFPAQLDMRHRLSELSQFDLVYDLSAVLIHKGSGVNSGHYIAHIKDKNTGQWWEFDDELVTNLGNHPFGEGPSSSTIKSIVTDAIQSEVKIAESNGNKTHSQSSLMEIFSSCDAYMLMYHLKHAKNVSENGGIACGANHKEIEGVVATARDGTSLPSHLYDEIHNLNASYLDACQQYSHRKELELSRITDRRKEVRSVLAEASVPPLERPFYWISSDWLRQWADNIIPTSIDNTFIQCSHGKVPVSKVTSIKRLSAKAWDKLFSKYGGMPTLSHDDHCRDCLIHGAQTVVSADTYRGRRESLKPLARDILDGNCLDGKYFISRPWLLQWWKRKVLDAPSEADAGLTAAISCPHGLLMPEQAPGAKRVLIPETFWLFLYEDAISVKPDDPLGGPTLPLSSIECSQCINELSEAACLEDSLRLVKQKQRQNHEKLFQAKSMPLSVDCKYFLLPSSWILKWRNYISPTFKNPDKPETLDGVIDSLMCEKHSQLVERPPQLVFRRGAINQRESSAGLTIISENDWICFCEEWGGTVTKGISATIYHINDSDNFLTGSDDKMLICEDQLHTGDKVNNENGTGQILIKTCPEVCESCIGEKESCDLMHKLNYCNEDISVILVRGKEVPKSILEASKGLIETDRRVSKRSRKTKNGSSVSLKVSASTSLYQLKMMIWESFGVVKENQILHKGDRIIDNDDESATLADANIFAGDQIIVRDSEIHENRDIADELCSDRMDLQHTEEGFRGTLLTTNISSQVV* 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0525 1076 Pfam Ubiquitin carboxyl-terminal hydrolase 108 441 IPR001394 GO:0004843|GO:0016579
Tpr7g0525 1076 ProSiteProfiles Ubiquitin domain profile. 967 1033 IPR000626 GO:0005515
Tpr7g0525 1076 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 107 444 IPR028889 -
Tpr7g0525 1076 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 344 362 IPR018200 GO:0004843|GO:0006511
Tpr7g0525 1076 CDD Peptidase_C19L 108 441 IPR033841 GO:0004843
Tpr7g0525 1076 ProSiteProfiles DUSP domain profile. 615 722 IPR006615 GO:0004843
Tpr7g0525 1076 SUPERFAMILY Ubiquitin-like 967 1034 IPR029071 -
Tpr7g0525 1076 Gene3D Cysteine proteinases 93 444 - -
Tpr7g0525 1076 CDD Ubl_USP48 966 1067 IPR044743 GO:0004197|GO:0004843|GO:0016579
Tpr7g0525 1076 Gene3D - 965 1036 - -
Tpr7g0525 1076 SMART dusp 526 602 IPR006615 GO:0004843
Tpr7g0525 1076 ProSiteProfiles DUSP domain profile. 508 600 IPR006615 GO:0004843
Tpr7g0525 1076 Gene3D - 739 856 IPR035927 -
Tpr7g0525 1076 SUPERFAMILY Cysteine proteinases 106 445 IPR038765 -
Tpr7g0525 1076 SUPERFAMILY DUSP-like 529 600 IPR035927 -
Tpr7g0525 1076 ProSiteProfiles DUSP domain profile. 743 862 IPR006615 GO:0004843
Tpr7g0525 1076 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2 1046 - -
Tpr7g0525 1076 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 2 1046 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0525 Tpr-Chr7 4427053 4435934 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0525 86 385 Miscellaneous Gene Families AT4G31670 28.793 3.76e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0525 - - gmx:100815770 1825.45