Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0523 ATGCAGGGGATAAGTACAACAATAGGACAGCATATTGCCACATCACACCTATCAATATTTTCCACGTGTCACAATTTAAACTGTTTGACGTGTCTTTCTTCCTCAAAAGCTTCTTTCTCTGCAAAACCAAAACGACGTTGTTTAACACTGCACATGGCCATTTCCTTATGCACTACACTTCAACTTCAATTTCTCACTCTCAATTCATCCAAATCCACACTAACATCAATTCTCACAAATCCAACAACACGATATCAATTCTCAACCATCACCATGAACTTATGCACAACCAAATCCGAACCAGTAACCACCTCCTCAGCAGCATCTTCTTCCTCAATGCAGTACGTGCCAGAGCAAGATTCTAACGAAATGGAACGTGTTTCCAATCAAACATTCCAAAGGTACACTTCCAATAACACCAAAAGAAGTGGTAAAGGTACATCAATTGTGTGGTTTAGGAATGATCTCAGAGTTTTGGATAATGAGGCTCTTTATAAAGCTTGGATTTCCTCACAAACTCTATTGCCTGTTTATTGTATTGATCCTCGACTCTTTTCCACTACTCACTATTTCGGATTTCCGAAAACTGGAGCATTGAGAGCACAATTTCTCCTCGAATGTTTGGCTGACTTGAAGAAGAATCTAATGAAACGGGGACTTAATTTGCTTATTCAACATGGGAAACCTGAAGATATTATTCCTTCTCTAGCTAAAGCTTACGGAGCTCATACAGTATATGCACAAAAAGAAACTTGCAGTGAGGAGATAAATGTTGAAAATTCTGTCAGCAGATGCCTTCAACAAGTGGTGCTACCATCTGAAGAATCCGCTGCGGCGTCAACAACTTCAAACAGCCACCCTAAGTTACAGTTTGTTTGGGGAACCACCATGTACCACCGTGATGATCTTCCTTTTGATGTCACTTGTTTGCCGGATGTTTATACTCAATTTCGTAAGACCATTGAAGCTAAATGTGTCGTGCGCTCATGCATCAAATTGCCAACTTCACTCGGACCAGCTCCCCCAATTGAGGATTGGGGACGTCTTCCTTCAATGGAGCAGTTGGGACTTTGCTCTCAGAATGTTAGCAAGGGGATGAAATTTGTCGGGGGTGAAACTGCTGGCCTGAACAGAATATATGAATACTTTTGGAAGAAGGATTTACTGAAGGTATATAAAGAGACCCGAAATGGGATGTTAGGGCCTGATTATTCTACTAAATTCTCTCCATGGCTTGCATCCGGAAGTTTGTCACCTCGTCTCATACACGAAGAGGTAAAGAGATATGAGAATGAAAGACAAGCAAATAGTTCTACCTACTGGGTTTTGTTCGAGTTGATATGGAGGGATTACTTTAGGTTTCTATCAGTCAAATATGGAAATTCAATTTTCCATATAGGTGGACCTAGAAATATTCAGCATAATTGGAGCCAAGACAAGAAATTATTTGAATCCTGGAGAGATGGTTGTACAGGGTATCCTCTGATAGATGCCAACATGAAGGAATTATCAACGACAGGTTTTATGTCGAACCGAGGACGACAGATTGTGTGTTCGTTTCTAGTTCGTGATATGGGCATAGATTGGCGCATGGGAGCCGAATGGTTTGAGACATGTCTTTTGGATTATGATCCATGCTCTAATTATGGAAACTGGACTTATGGATCAGGAGTTGGGAATGATCCTAGGGAAGACCGTTATTTCAGCATACCAAAACAAGCACAAACATATGACCCAGAAGGCGAATATGTTGCATACTGGTTGCCACAGTTACGAGCAATCTCAAAAGATAAAAGGAACTTTCCTGGTAATTTATATATTCGTCAAATTGTGCCTCTCAAGTTTGGAACAACTAGTAGACACAATAAGGAGGACAAGTCACATGGTGCAAGAAGAGGTAATGATCGAAGATCGAACAGGAGACAAGTTTAG 1932 0.4073 MQGISTTIGQHIATSHLSIFSTCHNLNCLTCLSSSKASFSAKPKRRCLTLHMAISLCTTLQLQFLTLNSSKSTLTSILTNPTTRYQFSTITMNLCTTKSEPVTTSSAASSSSMQYVPEQDSNEMERVSNQTFQRYTSNNTKRSGKGTSIVWFRNDLRVLDNEALYKAWISSQTLLPVYCIDPRLFSTTHYFGFPKTGALRAQFLLECLADLKKNLMKRGLNLLIQHGKPEDIIPSLAKAYGAHTVYAQKETCSEEINVENSVSRCLQQVVLPSEESAAASTTSNSHPKLQFVWGTTMYHRDDLPFDVTCLPDVYTQFRKTIEAKCVVRSCIKLPTSLGPAPPIEDWGRLPSMEQLGLCSQNVSKGMKFVGGETAGLNRIYEYFWKKDLLKVYKETRNGMLGPDYSTKFSPWLASGSLSPRLIHEEVKRYENERQANSSTYWVLFELIWRDYFRFLSVKYGNSIFHIGGPRNIQHNWSQDKKLFESWRDGCTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGSGVGNDPREDRYFSIPKQAQTYDPEGEYVAYWLPQLRAISKDKRNFPGNLYIRQIVPLKFGTTSRHNKEDKSHGARRGNDRRSNRRQV* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0523 643 PANTHER CRYPTOCHROME DASH 132 625 - -
Tpr7g0523 643 Gene3D - 295 464 - -
Tpr7g0523 643 MobiDBLite consensus disorder prediction 618 643 - -
Tpr7g0523 643 PRINTS DNA photolyase signature 491 507 IPR002081 -
Tpr7g0523 643 PRINTS DNA photolyase signature 511 529 IPR002081 -
Tpr7g0523 643 PRINTS DNA photolyase signature 550 564 IPR002081 -
Tpr7g0523 643 Gene3D HUPs 110 294 IPR014729 -
Tpr7g0523 643 PANTHER CRYPTOCHROME 132 625 IPR002081 -
Tpr7g0523 643 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 145 343 IPR036155 -
Tpr7g0523 643 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 465 619 - -
Tpr7g0523 643 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 366 600 IPR036134 -
Tpr7g0523 643 TIGRFAM crypto_DASH: cryptochrome, DASH family 147 590 IPR014133 GO:0003913|GO:0006281
Tpr7g0523 643 Pfam FAD binding domain of DNA photolyase 444 598 IPR005101 -
Tpr7g0523 643 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 146 288 IPR006050 -
Tpr7g0523 643 Pfam DNA photolyase 148 326 IPR006050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0523 Tpr-Chr7 4410631 4415330 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0523 K25656 - gmx:100783312 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0523 7 4410631 4415330 Tpr7g0523 7 4410631 4415330 ECH