Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0490 ATGGCAGGGTTAAATTTTGAAGCTGAATATGTTGATAGCTTTGATCTTCTGAAGGTTTTTGCAGCTGAAGGTGTTGAGTTCCTTTTATCTTCTGAAGGCAAGGTACCCTTGTCTGATTGCAATGGGAAAATCATCTGCCTGTTTTTCTCTGCCAACTGGTGTAGGCCTTGCAGACTTTTCATTCCTCATTTGGTTGATCTTTATGAAACACTGCGAAAGAGGGGGATAAATATAGAGATCATATTCATCTCTTTTGACCATGACGAGGATGGATTTAAAGAACACATCAAGAGTATGCCGTGGCTAGCCGTCCCATTTGATGCAAATTTGCATAGAAGACTGATTGATAGATATCGGGTTGATCGAATCCCGTCATTCATTCCATTTTGTTCTGATGCCTTAACTGTTGATGAAAACATGATTGAGTGGATTGAGGATTATGGTGCTGATGCATTTCCTTTCACAAGGAAGAGACGTGAGGAATTGAAAGCCATAGATAAAAGTAAACGCGAAGAAGTAAATTTGGAAGAATTATTGACACATGAAGAGCGCAACTTTCTCATTTCTGGAGATGATAGAAAGGTGCTTGTATCTGAACTAGCCGGGAAAACGATAGGCCTATTTTTCGGTGCCTACTGGTCTCCTCCATGTCGCGCCTTCACCGTTCAACTTGCAGATGTGTACAACAATCTCAAGGACGCAAAAGGACACTGCTTTGAGATTGTTTTAGTTTCAACAGATAAGGATCTCAGAGAATTCAATGTCAACAGAACTAGTATGCCTTGGCTTTCTATCCCATATGAAGACAGAACAAGACATGACCTGTGTAGAATCTTTGATATAAAGAAAATTCCAGCTTTGGTTTTTATTGGACCGGATGGCAAAGTCATTAGTCTGGATGGAAAATTTATGGTCTCCTCATATGGCGCAGAAGCTTTTCCATTTACAGAATCGAGGATTAGAGATTTAGAAGCGGCTCTGAGAAAGGAAGGAGATGCGTTGCCTCAACAGGTTGTGGATGTCAAGCATGAACATGTACTTAAATTGGATAGGGCTAAAGCATATGTATGTGATGCTTGTAAGAAACAAGGCAAGTTCTGGGCATTCTCTTGTGATGTCTGTGACTATGATCTTCATCCAAGTTGTCTAGAGAAGGTCAACAATGACCAAAATTGGTAG 1179 0.4046 MAGLNFEAEYVDSFDLLKVFAAEGVEFLLSSEGKVPLSDCNGKIICLFFSANWCRPCRLFIPHLVDLYETLRKRGINIEIIFISFDHDEDGFKEHIKSMPWLAVPFDANLHRRLIDRYRVDRIPSFIPFCSDALTVDENMIEWIEDYGADAFPFTRKRREELKAIDKSKREEVNLEELLTHEERNFLISGDDRKVLVSELAGKTIGLFFGAYWSPPCRAFTVQLADVYNNLKDAKGHCFEIVLVSTDKDLREFNVNRTSMPWLSIPYEDRTRHDLCRIFDIKKIPALVFIGPDGKVISLDGKFMVSSYGAEAFPFTESRIRDLEAALRKEGDALPQQVVDVKHEHVLKLDRAKAYVCDACKKQGKFWAFSCDVCDYDLHPSCLEKVNNDQNW* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0490 392 Pfam Thioredoxin-like 42 127 IPR012336 -
Tpr7g0490 392 Pfam Thioredoxin-like 202 296 IPR012336 -
Tpr7g0490 392 Pfam C1 domain 342 382 IPR004146 -
Tpr7g0490 392 Gene3D Glutaredoxin 20 158 - -
Tpr7g0490 392 Gene3D Glutaredoxin 177 317 - -
Tpr7g0490 392 SUPERFAMILY Thioredoxin-like 28 145 IPR036249 -
Tpr7g0490 392 PANTHER NUCLEOREDOXIN 3-RELATED 1 385 - -
Tpr7g0490 392 PANTHER THIOREDOXIN 1 385 - -
Tpr7g0490 392 SUPERFAMILY Cysteine-rich domain 334 383 IPR046349 -
Tpr7g0490 392 Coils Coil 165 185 - -
Tpr7g0490 392 ProSiteProfiles Thioredoxin domain profile. 16 149 IPR013766 -
Tpr7g0490 392 ProSiteProfiles Thioredoxin domain profile. 151 325 IPR013766 -
Tpr7g0490 392 SUPERFAMILY Thioredoxin-like 189 297 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0490 Tpr-Chr7 4151402 4157520 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0490 K17609 - gmx:100778160 680.633