Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0475 ATGGGTCTAACAGAAGCATGTTCCAAATTCATAGTTGAATTTTTACAAACATTCAAAAACTCACCACAAAACTCAATGCCTCATCATAATCACCTTGATCAAAATCATCAACAGAGTATACTCAAGCTCGACGAAAGGATGGTTCGAGCTCTTGTTACCGTCTTTGGAATGCAAAACAATGGAAGAATCAAGAAGGAAAATGCTAGGCAAGTGGTTGAAAAACTTGGTCTGATCTATGGTTCTGATCAGAAGGATAACAAGGCCTTTCAAGACGACGATGATGAAGAAGTAGTTGTGGAAGAAGTGCTTGGTGAATTGGAGGACATGTCAAAGAGAAGTGAGTTATTGCTTGAAGCTTTCAAAATATTTGATGAGGATGGTGATGGATATATTGATGCAATGGAGTTGAAGAGAGTGCTTGATTGTTTGGGTTTGGATAAGGGTTGGGATATGAATACAATTGAAAAGATGGTGAAGGTTGTTGATTTGAACTTTGATGGAAAAGTTGATTTTGGTGAGTTTGAATTGATGATGGGATAG 540 0.3759 MGLTEACSKFIVEFLQTFKNSPQNSMPHHNHLDQNHQQSILKLDERMVRALVTVFGMQNNGRIKKENARQVVEKLGLIYGSDQKDNKAFQDDDDEEVVVEEVLGELEDMSKRSELLLEAFKIFDEDGDGYIDAMELKRVLDCLGLDKGWDMNTIEKMVKVVDLNFDGKVDFGEFELMMG* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0475 179 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 85 178 - -
Tpr7g0475 179 Pfam EF-hand domain pair 116 178 IPR002048 GO:0005509
Tpr7g0475 179 ProSiteProfiles EF-hand calcium-binding domain profile. 111 146 IPR002048 GO:0005509
Tpr7g0475 179 SUPERFAMILY EF-hand 46 178 IPR011992 -
Tpr7g0475 179 SMART efh_1 115 143 IPR002048 GO:0005509
Tpr7g0475 179 SMART efh_1 153 179 IPR002048 GO:0005509
Tpr7g0475 179 ProSitePatterns EF-hand calcium-binding domain. 124 136 IPR018247 -
Tpr7g0475 179 Gene3D - 16 179 - -
Tpr7g0475 179 PANTHER CALCIUM-BINDING PROTEIN CML42 85 178 - -
Tpr7g0475 179 ProSiteProfiles EF-hand calcium-binding domain profile. 149 179 IPR002048 GO:0005509
Tpr7g0475 179 CDD EFh 116 174 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0475 Tpr-Chr7 4051008 4051827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0475 116 178 EF-hand Containing Proteins AT4G20780 58.730 2.55e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0475 - - adu:107470962 251.906