Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0465 ATGGTAGAAGAGACGAAAGAGAAGGTTCCTGAATTCAAATGGGGGAAAAAGAAAGGGTTTGGTGGTAGAAATAAGGATGTCACTTTTTACGAATCGTTTACTTACGATGGTGTTGATTACAATCTTTATGATTCTGTTTATCTTTACAAGGAAGGTGAAACTGAACCTTTTATTGGTAAACTAATCAAAATTTGGGAAAATGGTGATAAGAGTAAGAAAGTTAAGGTTTTGTGGTTCTTTCGTCCATGTGAGATTGTTAATTTCTTGGAAGGATATGAGGTACTTCAAAATGAGTTGTTTTTGGCTGCTGGTGAAGGATTAGGGCTAACAAATATCAATCCTCTGGAAGCTATTGCTGGAAAATGCAATGTTGTTTGCATTTCAAAGGACGACAGAAATCCACATCCTTCAGACAAAGATCTTCCAAATGCTGACTTTGTATGGCATTGTTTCTTTGATGTTGGGCAGCTTAAAATACTGGACAAGATAGATGATAAGATTGCTGGAGTTGAAGTTAAAAATATTTTTAACAATTTATATAGTCGAAAGCTTGGTGGTCTTTCGAAACTTGGTTTAGATGAGAAAGAAGTTAGTGTGAAAGTCACGACGAGTAATGAAGCGGTGACTCTTTCAAGTGAAAAAAACAATCAACTTTTGATTGAAAAACTAGATGGCAAGCGTTTTGAAACTGCTGATTCTAAGCCATCATTGGTAGAAAGGCGTACCTCTAGCCTTGGTTTAAAGGATGGTAGTAAATCTAATGGTGGTTTGGTCCCTATTTCCCACGACAAGACCTTGCCTCAAGCTAAAGAGAAAGCGAATGGGGTTTATAAGGCTTCTTTGGCTAAACAAAAATCATCTACTAATGATAAGATCGTTTTGAAGTCTAAGATTGATTCGGAAACGAGTGGATGTGATATTGTTGGTATCTCCGATCGACAAATCAACAAGCGATTAGGTGAGGGCAAGACTTCTGAGAAGGAAAAATATGGCGTTTCTAGTGCAAAGATAACAAATAATGTTCAAAATAGAAGCAACTATGATGATGATGATGATGATAATGTGAAGAACGTCCCTTCAAAAAGGCTAAAGATTGACACAGTGCCAACAAAACTCTCTAGTGACAAGTTTCCTGATAGGCAAATCAACAAGCGAATGAGGGAGAGCAAGGCATATGAAGAGGAAAAACATGGTGTTTCTAGTTCGAAGATATCAAATAATGTACAAAATCGAAGGAGCTATGGTGATGTTGATGCGAAGGAAGTCCCTTCGAAAAATCTAAAGATTGACACAATGCCAGCTAAACTCTCTGGTGACAAGTTGCGGAAAGAATCGTCTACAACTTCTCCAAACTTGGAGCACAAGCTAGATTACCGTGTAATGGAAGTTACTCAAAGACCTGAAGTTGATAGAAGCAAATGGTTTAAGCCAATGCCTTGGGAGGAAAGTATGAAAGATGCTTATAAGCAAGGGAGACTTGTGCTGCTTGAAAATTTGGATCCTTCTTTAACTTCATCAGAAGTACAGGATATTATTTGGCATGGCTTTAAAGAAAGATGTACTGCAAAGATGATCCAGAAAACCACATATTCTAGTCCTCATTCTGGTCAAGCTTTTGTTATATTCAAAAGAAAGGAAGCAGCAGAGTCGGTTATTAGAAAATTAGAGGAGGGCTGTTTCTTGATGTCAAATGGGCGCCCACTTGTGGGAAGCTTTGGACTCCCTTGCTTTCCGGAAAAGAAGCGAACATTTTATGGTCATTATGCTATTGATCAACCTCGACAACGTGAGATGAAAGACGCAGTATCGACTTCACATTGTTCTCAGGCCAACAACATTGAATATGATATGGCTGTAGAGTGGTGTTTACTACAAGAAAGAGTAGACAAAACTTGGAGAAAATTGTATCAGCGACAAAGCGAGGAGTTAAGCAAACTCAAAGCCAAGTTGAAGTCTAAAATCTAA 1965 0.3807 MVEETKEKVPEFKWGKKKGFGGRNKDVTFYESFTYDGVDYNLYDSVYLYKEGETEPFIGKLIKIWENGDKSKKVKVLWFFRPCEIVNFLEGYEVLQNELFLAAGEGLGLTNINPLEAIAGKCNVVCISKDDRNPHPSDKDLPNADFVWHCFFDVGQLKILDKIDDKIAGVEVKNIFNNLYSRKLGGLSKLGLDEKEVSVKVTTSNEAVTLSSEKNNQLLIEKLDGKRFETADSKPSLVERRTSSLGLKDGSKSNGGLVPISHDKTLPQAKEKANGVYKASLAKQKSSTNDKIVLKSKIDSETSGCDIVGISDRQINKRLGEGKTSEKEKYGVSSAKITNNVQNRSNYDDDDDDNVKNVPSKRLKIDTVPTKLSSDKFPDRQINKRMRESKAYEEEKHGVSSSKISNNVQNRRSYGDVDAKEVPSKNLKIDTMPAKLSGDKLRKESSTTSPNLEHKLDYRVMEVTQRPEVDRSKWFKPMPWEESMKDAYKQGRLVLLENLDPSLTSSEVQDIIWHGFKERCTAKMIQKTTYSSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKRTFYGHYAIDQPRQREMKDAVSTSHCSQANNIEYDMAVEWCLLQERVDKTWRKLYQRQSEELSKLKAKLKSKI* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0465 654 MobiDBLite consensus disorder prediction 378 431 - -
Tpr7g0465 654 SMART BAH_4 38 164 IPR001025 GO:0003682
Tpr7g0465 654 Gene3D - 478 572 IPR012677 -
Tpr7g0465 654 Coils Coil 633 653 - -
Tpr7g0465 654 PANTHER PROTEIN ANTI-SILENCING 1 1 652 - -
Tpr7g0465 654 MobiDBLite consensus disorder prediction 319 358 - -
Tpr7g0465 654 ProSiteProfiles BAH domain profile. 38 163 IPR001025 GO:0003682
Tpr7g0465 654 Gene3D - 7 162 IPR043151 -
Tpr7g0465 654 CDD RRM_SF 494 568 - -
Tpr7g0465 654 Pfam BAH domain 40 128 IPR001025 GO:0003682
Tpr7g0465 654 SUPERFAMILY RNA-binding domain, RBD 488 564 IPR035979 GO:0003676
Tpr7g0465 654 MobiDBLite consensus disorder prediction 378 400 - -
Tpr7g0465 654 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 492 575 IPR000504 GO:0003723
Tpr7g0465 654 PANTHER PROTEIN ANTI-SILENCING 1 1 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0465 Tpr-Chr7 3978250 3990360 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0465 - - cam:101508998 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0465 7 3978250 3990360 Tpr7g0465 7 3978250 3990360 ECH