Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0460 ATGGTTGTTCTTCATCTCCCAAGGCTATTATCCTTTTCCCTTTCTCGTCAAACCTATTCCATTTCAAAACGCACCTTAACCACTCTCTTACATCCACCAAAATCCACTCTCACAACTTCAGAACCAAACCTAGAACTAATATCCACAACAATAACCCCTAAACCCCAAACCTTATCTCTCGAAAATATCTTCATTCCTCCAAACACTAATGTCACTGAAAACGCAAGAATATTAAACGGTTCAAATATATTACTCAGTAATTACGCTACCGATGCTCAAATTATACAAGCTGATTTTGTCAAAAGTAGTGTTAGATTCGAAGATTGTCCTTCTGATGGTCTTCCTGAATTCGCTCTTGTTGGTCGTTCCAATGTTGGCAAATCTTCACTTCTTAATTCTATTGTTCGCCGCAAGAAACTCGCTTTAACTTCAAAGAAACCTGGGAAGACACAATTGATTAATCATTTTCGTATTAATGATAGTTGGTACCTCGTTGATTTGCCTGGATATGGGTATGCATCTGCACCGCAAGAACTTAGAAAGGATTGGGATAAATTCACCAAAGACTATTTTCTTAACCGGTCAACATTGGTTTCAGTTTTCCTTCTAATAGATGGTAGCATTCCCGCTAAAAAAATTGATCTTGAGTATGCACGCTGGTTGGGTGAGAATCAGATCCCAATGACAATAATCTTCACCAAATGTGACAAACGGAAGAAGAAAAAGAATGGAGAAAAGAACGGAGGCAAAAAGCCTGAGGATAATGTCAATGATTTTCAGGAGTTGATACGTGGCTACTTCGAAACCGTGCCTCCATGGATCATGACCAGTAATGTCACCCATGAAGGTCGTGACGAGGTACTCCTCCATATGGCTCAACTTCGAAACTACTGGCTCAAGCACTAG 906 0.3974 MVVLHLPRLLSFSLSRQTYSISKRTLTTLLHPPKSTLTTSEPNLELISTTITPKPQTLSLENIFIPPNTNVTENARILNGSNILLSNYATDAQIIQADFVKSSVRFEDCPSDGLPEFALVGRSNVGKSSLLNSIVRRKKLALTSKKPGKTQLINHFRINDSWYLVDLPGYGYASAPQELRKDWDKFTKDYFLNRSTLVSVFLLIDGSIPAKKIDLEYARWLGENQIPMTIIFTKCDKRKKKKNGEKNGGKKPEDNVNDFQELIRGYFETVPPWIMTSNVTHEGRDEVLLHMAQLRNYWLKH* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0460 301 Pfam 50S ribosome-binding GTPase 117 234 IPR006073 GO:0005525
Tpr7g0460 301 CDD YihA_EngB 116 294 IPR030393 GO:0005525
Tpr7g0460 301 Gene3D - 89 297 IPR027417 -
Tpr7g0460 301 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 52 298 - -
Tpr7g0460 301 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 113 297 IPR030393 GO:0005525
Tpr7g0460 301 Hamap Probable GTP-binding protein EngB [engB]. 102 295 IPR019987 GO:0005525
Tpr7g0460 301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 297 IPR027417 -
Tpr7g0460 301 TIGRFAM GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 97 247 IPR019987 GO:0005525
Tpr7g0460 301 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 52 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0460 Tpr-Chr7 3911718 3914666 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0460 K03978 - gmx:100784426 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0460 7 3911718 3914666 Tpr7g0460 7 3911718 3914666 ECH