Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0435 ATGGCATCTATTAGAAGAACCTTGTCTCCAGTTGCTCGAGCCGGAAATGTAGCAAATGTTGAAGGCTTTTCAGTAGCTTCCCCTTTGTCTAAGTCCTCATCAAGTCCTCAAAACTCTCCTTCGTCGGTCACATCATTGGACTCCCGTGCTTTTTTGCTTGGTGTTTTCTACCCAAGATCTTTGAGGGCTATTGAGAGATCAAATTCAAAGCCTAAGGGCCAGCTTTGGAGGAAAGTGCTTTTCCATTTTTTCATTTGTTTCATGGTTGGTGTTTCTATTGGACTCATTCCGCTCGCATCAACTAACTTGTCCTTGAATCTCATGTCGAAAGACTCACAACATCAAGATTTCTCTTTTGAGATAATATCTAGAGTTGGAAATTTACGGTCGCTTGAAAATTTGAAGACAAATGAGACATCATTAGTTGATGAGGATGTGAAATTTGATGCTACTTTGATTTCAGAAGTGCAAGAACAGGAACTAACAAATGGTGTAGCATATAATGCCTCGGATAGCAAATTCGGTGAAGATCTATATTTGGATTCTCAAAAGCTTCTCATAATTGTCACGCCGACTTACAATCGTCTATTTCAAGCATATTACTTGCATCACTTGTCACAAACTTTGAAATTGGTCTCACCTCCTTTGTTATGGATTGTTATTGAGATGAATTCTCAATCTGATGAAACTGCTGACATCTTGAGGAGTAGCGGGATTATGTATAGGCATCTCGTCTGCAAAATGAATCTGACCAACACAAGCCATAGGAACATTCTTATGAGAAATGTTGCAATAGCTCACATTGAAACTCACCGCCTCAATGGAATTGTGTATTTTGCAGACGATGATAACATCTACTCGGTGGAACTCTTTCAGCAAATGAGAGATATAAGGCGATTTGGAACATGGACTGTTGCAAGACTATCGGAGGATAGAAGTGGCATTGTCTTGCAAGGGCCCATTTGTGATGGAAGTCAAGTGATTGGATGGCACACAAATAATGAATCAGATGGGAAATCTAAAAGATTTCACGCTGAAATGCCTGGTTTCGCCTTCAATAGCACGATACTTTGGGATCGAAAGAAGTGGCACCGGCCCAATCCTCAACCTATCAGACAGCTCGAATCAGTCAAGGAAAATTTGTGGGTTAGCACGTTGATTGAGCAGATTGTTGAAGATGAAGGTGAAATGGAGGGTTTAATGAACGACTGCTCAAGAGTTATGGTTTGGCATATTGATCTTGAGTCGTCTTATTCTTTCTATCCTCAGAAATGGATTACCGAGAACAACCTCGATGCCATTTGGAATCTTCCACTTGCGTGA 1323 0.4067 MASIRRTLSPVARAGNVANVEGFSVASPLSKSSSSPQNSPSSVTSLDSRAFLLGVFYPRSLRAIERSNSKPKGQLWRKVLFHFFICFMVGVSIGLIPLASTNLSLNLMSKDSQHQDFSFEIISRVGNLRSLENLKTNETSLVDEDVKFDATLISEVQEQELTNGVAYNASDSKFGEDLYLDSQKLLIIVTPTYNRLFQAYYLHHLSQTLKLVSPPLLWIVIEMNSQSDETADILRSSGIMYRHLVCKMNLTNTSHRNILMRNVAIAHIETHRLNGIVYFADDDNIYSVELFQQMRDIRRFGTWTVARLSEDRSGIVLQGPICDGSQVIGWHTNNESDGKSKRFHAEMPGFAFNSTILWDRKKWHRPNPQPIRQLESVKENLWVSTLIEQIVEDEGEMEGLMNDCSRVMVWHIDLESSYSFYPQKWITENNLDAIWNLPLA* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0435 440 Pfam Glycosyltransferase family 43 205 415 IPR005027 GO:0015018|GO:0016020
Tpr7g0435 440 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 434 IPR005027 GO:0015018|GO:0016020
Tpr7g0435 440 SUPERFAMILY Nucleotide-diphospho-sugar transferases 185 431 IPR029044 -
Tpr7g0435 440 CDD GlcAT-I 184 415 IPR005027 GO:0015018|GO:0016020
Tpr7g0435 440 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9L-RELATED 1 434 - -
Tpr7g0435 440 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 185 431 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0435 Tpr-Chr7 3616890 3620252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0435 1 434 Glycosyltransferase AT1G27600 44.064 9.23e-119 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0435 K20869 - gmx:100808765 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0435 7 3616890 3620252 Tpr7g0435 7 3616890 3620252 ECH