Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0425 ATGAACTCCAGCGCCTCTGTCTCTAAATGCTTCGTTCATCAGCTCGAGAATATAGACGAGAACGTTCCTGCATCATCTTGCGCACAGCCTGAAACCCCTACAGAATCTATGGAGTTCCTTGCTAGATCTTGGAGTCTTTTTGCCACGGAACTCTCCAAAGCACTGCATAGCACCAATACTACGATGTCCACCGCCATTGAGATGCAACTCTTATGTTCTTCTGACCAGTTTTATACCACTGCCTCTAAGGATTCTGATTTATTTTTACTTCATCAAGCAATTTCTCTAGAATTCCTGTCCAGTCAAAACTTGCTGAGAAATGGGCTTTACAGGAGCCTGATAAGAGGAAGGACAACAGGTAGGCGGTTGAAAGATCAGAAGGAGAGGAAAAAGCAGGAAATTAGGACTCATAATGCTCAATTGCACGCTGCAGTATCAGTAGTTGGTGTTGCTGCCGCTGTTGCAGCTGCTGCGGCTTCAATAGCATCATCCGGAAAGCCTAATGCCTACCAAAAGAACCCTATCATGGCTTCTGCTGCAATTGCATCTGCAGCAGCTCTAGTAGCCTCTCACTGCATTGAGATTGCAGAAGATATGGGAGCTGAACAGGATCAAATCATAACAGCAGTTGACTCTGCTATTAATGCAAAAACTAATGGAGATATTATGACTCTAACAGCTGGAGCAGCCACAGCACTGCGAGGAGCTGCTACTTTAAAGGCGCGGCTGCAGAAGGGGTTTGGAGCTACTACAATTCCTCCAATTGAGGAGAAGTGCGGTGAAGCCAAAGAAACAAACATATTGACAGCATTGGACTACGTCTTTAGAGGTGGAGCACTTCTCAAACGTACAAGAAAAGGAGTTCTTCACTGGAAGCAAGTCTCTTTCAATGTTAATTCAAATTTGCAGGTAGTAGCCAAAATGAAAAGCAAGCATATTGGAGGAACATTTACGAAAAAGAAGAAATATATAGTCACTGGAGTGTGCAGCGATATCCCTGCTTGGCCGGGAAGGGAGAAGGAAGACATTGGCGAAAAGAGAGCATACTTTGGAATAAAAACAGAAGACAGATCAATAGAATTTGAATGTGGAAGTAAAGGAGACAAACTGAGCTGGTTAGAGGGAATCCAGTACATGTTGAATTGCAGTGCCAAAGTAACATACTAA 1167 0.4379 MNSSASVSKCFVHQLENIDENVPASSCAQPETPTESMEFLARSWSLFATELSKALHSTNTTMSTAIEMQLLCSSDQFYTTASKDSDLFLLHQAISLEFLSSQNLLRNGLYRSLIRGRTTGRRLKDQKERKKQEIRTHNAQLHAAVSVVGVAAAVAAAAASIASSGKPNAYQKNPIMASAAIASAAALVASHCIEIAEDMGAEQDQIITAVDSAINAKTNGDIMTLTAGAATALRGAATLKARLQKGFGATTIPPIEEKCGEAKETNILTALDYVFRGGALLKRTRKGVLHWKQVSFNVNSNLQVVAKMKSKHIGGTFTKKKKYIVTGVCSDIPAWPGREKEDIGEKRAYFGIKTEDRSIEFECGSKGDKLSWLEGIQYMLNCSAKVTY* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0425 388 Pfam Plant pleckstrin homology-like region 280 383 IPR013666 -
Tpr7g0425 388 PANTHER EXPRESSED PROTEIN 8 385 IPR040269 -
Tpr7g0425 388 SUPERFAMILY PH domain-like 264 380 - -
Tpr7g0425 388 Coils Coil 120 140 - -
Tpr7g0425 388 SMART PH_update 274 383 IPR001849 -
Tpr7g0425 388 Pfam Auxin canalisation 81 256 IPR008546 -
Tpr7g0425 388 Pfam Auxin canalisation 30 74 IPR008546 -
Tpr7g0425 388 PANTHER PHOSPHOINOSITIDE BINDING PROTEIN 8 385 - -
Tpr7g0425 388 Gene3D - 254 387 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0425 Tpr-Chr7 3521318 3538507 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0425 - - gmx:100814154 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0425 7 3521318 3538507 Tpr7g0425 7 3521318 3538507 ECH