Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr7g0412 | ATGGAAGACGCCGGAAGTTATCCGAACCCCGACAACCTATCGCGCAAGATCGTTGACGTCGCTGCTGGTGAATCACACACTCTCCTTCTTACTGGAGATGGCAATGTGTACACTTGGGGTAAAGGAATGTTTGGAAGGCTTGGTCTTGGTTCTCAAAAAGATGAACTTTCGCCAATAAAGCTCAAATTTCAAAACCCTAATGGAACACTTGGGGTAGACTCTGTCAAAATAGTGGGAATTGCTGCTGGTGCTTATCATAGTCTTGCTCTTGCAGAAGATGGATCTGTTTGGTGCTGGGGTTACAATAGCTATGGTCAACTTGGCATAAGTGGAGAGGATGCGTATGATTCCCTAGTTCCTTGCTTAATTAGCACGTTTCTTGAGCTGCAACCGCCCGATTCTTCAACAGGTCTATTTGAAACAGAAGCCAAACCATCACTAAAGATGTGTAGTGTCAAAGCAGGAGGAATGATGTCTCTGGGTATTGATAATCATGGCACCCTGTGGATGTGGGGTAACATCCCACAAGAAAGCAAAGAAGGCGGGTTATCTATTGTAAGCAGTTTCATTCCAACACCAGTCTGGGATTTTCATGGTCGAGCTGTTGTCAAGGTTGCATGTGGAAACGAGCATATTGTTGCTCTGGTTAATGCTACAAAATCTCATGAGGATGAAGATCTAATGTGCTACTCTTGGGGTAATAACAGTCATGGCCAGTTAGGCTTGGGGGATAGGCAGAGCAGGCTGCATCCAGAAGTTGTAAAAATATTTGACGAGGAGACTCCTTGGACAACTTATGAGGTAGCATGTGGCGCCTTTCACACTGCTTTGCTCGCTCGCAAAAAGAAAACTGGTGACACATTAGAAAGCATGTGCTGGACCTTTGGTCTTAGTGAAAATGGCCAACTCGGGCATGGAACAACGCAGAGCGCTTTATTTCCTACGCCCATTAAAGAATTGCCACAAAATGCATATCTTATTTCTGTTGACTGTGGCTTATTTCATACAAGTGTTGTTTCCTCAACTGGTGATGTTTGGTCATGGGGAATGGAGAAAGGTCTTGGCTTATGTCCTGATGCTAATCGTTCTGAAACAGGTTCTGGTGGTGACGCCCTCTCTCCCTTTCCCATCTCATGCAAGCCAAATCAACCTATTTTTCCGGGTCCTGTGAAAGTCGTGTGTGGGGCAGCACATACTGTTGTTGTTGCACAGAAGGGACATGAGGCGTGGTCTTGGGGTAGGGGAAGGAGTGGAGTTCTTGGGAATGGTAAGGAAATGGATAGTTACACTCCCACCATTGTTCTGTGGCCTCCAGCGACAGAGGATCTCAAGGAAGAAGAATTGAAGAGCTCTGATGAGCAAGATAAGGTGGCAGAAAAGAAAACCGAAGTAATAACAGAGACAGATGAGAAATTAACCTCGGCGTTGACTGAGCTGAAGCTGCTTCAGTCAAAGCTATCTATAATGGAAAAGTATGCCAGTATACTTCATGGTTCTATTTTTGGAAAACCTTTTGATGAGCAAGATATCCCTGTTTCAATGCGGAATTCGGGTTCATTGGATATTGCAAAAGAATGGGACAACATGTTAGAGGCAGCAGATAATAGGAAGCTAGTTAGGATGGAAATGTTTTATCGCGACATGCTAGCTGGTGTCAAAGACAAATTAATGAAGAGAAAGATCAAGGAAATTATAAAGGAGTGTCTTCAATCCTCAGAAGTGAATAATAATTAG | 1734 | 0.4412 | MEDAGSYPNPDNLSRKIVDVAAGESHTLLLTGDGNVYTWGKGMFGRLGLGSQKDELSPIKLKFQNPNGTLGVDSVKIVGIAAGAYHSLALAEDGSVWCWGYNSYGQLGISGEDAYDSLVPCLISTFLELQPPDSSTGLFETEAKPSLKMCSVKAGGMMSLGIDNHGTLWMWGNIPQESKEGGLSIVSSFIPTPVWDFHGRAVVKVACGNEHIVALVNATKSHEDEDLMCYSWGNNSHGQLGLGDRQSRLHPEVVKIFDEETPWTTYEVACGAFHTALLARKKKTGDTLESMCWTFGLSENGQLGHGTTQSALFPTPIKELPQNAYLISVDCGLFHTSVVSSTGDVWSWGMEKGLGLCPDANRSETGSGGDALSPFPISCKPNQPIFPGPVKVVCGAAHTVVVAQKGHEAWSWGRGRSGVLGNGKEMDSYTPTIVLWPPATEDLKEEELKSSDEQDKVAEKKTEVITETDEKLTSALTELKLLQSKLSIMEKYASILHGSIFGKPFDEQDIPVSMRNSGSLDIAKEWDNMLEAADNRKLVRMEMFYRDMLAGVKDKLMKRKIKEIIKECLQSSEVNNN* | 578 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr7g0412 | 577 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 343 | 405 | IPR000408 | - | |
| Tpr7g0412 | 577 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 94 | 165 | IPR000408 | - | |
| Tpr7g0412 | 577 | Coils | Coil | 443 | 463 | - | - | |
| Tpr7g0412 | 577 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 20 | 30 | IPR000408 | - | |
| Tpr7g0412 | 577 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 34 | 93 | IPR000408 | - | |
| Tpr7g0412 | 577 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 93 | 127 | IPR000408 | - | |
| Tpr7g0412 | 577 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 230 | 278 | IPR000408 | - | |
| Tpr7g0412 | 577 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 33 | 90 | IPR000408 | - | |
| Tpr7g0412 | 577 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 293 | 338 | IPR000408 | - | |
| Tpr7g0412 | 577 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 343 | 402 | IPR000408 | - | |
| Tpr7g0412 | 577 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 205 | 215 | IPR000408 | - | |
| Tpr7g0412 | 577 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE HERC2-LIKE PROTEIN | 2 | 575 | - | - | |
| Tpr7g0412 | 577 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 290 | 342 | IPR000408 | - | |
| Tpr7g0412 | 577 | Gene3D | - | 3 | 223 | IPR009091 | - | |
| Tpr7g0412 | 577 | Gene3D | - | 224 | 477 | IPR009091 | - | |
| Tpr7g0412 | 577 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 80 | 90 | IPR000408 | - | |
| Tpr7g0412 | 577 | PRINTS | Chromosome condensation regulator RCC1 signature | 35 | 51 | IPR000408 | - | |
| Tpr7g0412 | 577 | PRINTS | Chromosome condensation regulator RCC1 signature | 96 | 112 | IPR000408 | - | |
| Tpr7g0412 | 577 | PRINTS | Chromosome condensation regulator RCC1 signature | 166 | 182 | IPR000408 | - | |
| Tpr7g0412 | 577 | PRINTS | Chromosome condensation regulator RCC1 signature | 205 | 221 | IPR000408 | - | |
| Tpr7g0412 | 577 | PRINTS | Chromosome condensation regulator RCC1 signature | 332 | 350 | IPR000408 | - | |
| Tpr7g0412 | 577 | PRINTS | Chromosome condensation regulator RCC1 signature | 402 | 423 | IPR000408 | - | |
| Tpr7g0412 | 577 | SUPERFAMILY | RCC1/BLIP-II | 267 | 434 | IPR009091 | - | |
| Tpr7g0412 | 577 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 2 | 575 | - | - | |
| Tpr7g0412 | 577 | SUPERFAMILY | RCC1/BLIP-II | 10 | 320 | IPR009091 | - | |
| Tpr7g0412 | 577 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 166 | 218 | IPR000408 | - | |
| Tpr7g0412 | 577 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 227 | 281 | IPR000408 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr7g0412 | Tpr-Chr7 | 3392316 | 3395528 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr7g0412 | - | - | gmx:100815199 | 884.404 |
Event-related genes