Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0393 ATGAGAGAAAACTACAGAACAATGAAACAAGACACAGAAACAGAGTCATTGTGTCTACCAAACAATGTTACTGACATTACTTGCATGGAAAATCAACCAACTGTTATGATTGAGAAAGTAACCAAAACGGTGCGTTTGATAAGTTTTCTGATACAAAACGGTGTATCTAAGAGTAACAGAGTTATGCAAGATATTCAACAAGTTATGAAAAGAGGAAAAACCATAGGAAAAACACTGAACAATGTCATGGTGAAACATCATGAAGCACTCACGTGTCGTCCACGTGATGCAGATATGTATTTTGTTTCACCATTGGAGTATCAGTTCAGCTGTAGCAGCAGTCCCCCACCGCGGCTTTCTCGTGCTGTGAGCAGCAGGAGGAAGCTTTTATCTCCGGCGAAAGAGCATGGTCGTCGGCGGGAAGTTAAAGTGTGTTGCGGGAATGGAAATGAAGGGAGGCGCGTGAAGATGACGACGGTGGAGATGGAGGAGAAGGAGTTTCATGTGGACAAAGCGGCGGAGGAGTTTATTGATAGGTTTTACAGAGAACTGAGGTTACAGAAATGGTTGGATCATCAACATCAGTATTGCTGA 594 0.4293 MRENYRTMKQDTETESLCLPNNVTDITCMENQPTVMIEKVTKTVRLISFLIQNGVSKSNRVMQDIQQVMKRGKTIGKTLNNVMVKHHEALTCRPRDADMYFVSPLEYQFSCSSSPPPRLSRAVSSRRKLLSPAKEHGRRREVKVCCGNGNEGRRVKMTTVEMEEKEFHVDKAAEEFIDRFYRELRLQKWLDHQHQYC* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0393 197 Pfam Cotton fibre expressed protein 169 188 IPR008480 -
Tpr7g0393 197 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 29 193 - -
Tpr7g0393 197 PANTHER DUF761 DOMAIN PROTEIN 29 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0393 Tpr-Chr7 3257439 3258372 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0393 - - mtr:MTR_3g109920 268.855