Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0385 ATGGAAACTGATGATGAAATTGAAGTTGAAGAGGGTGGTATCCCCGAAACAGAGGAATTACAGATCGATCAGTTCCTCTTCGAAGAAGAAGAAGATGATGAACAATTCGATCACCCTCTCATCCACTTTTCCTCTCCATCTTCTTCTTCCTCTTCCCAAGACCAACCTAATGGCATTGTCAATGGAAATTCATCAGATGAATTTACTTTCAATACCAGTATCGCTTCTTTGCACACATATCTTGGAGATGTTGAAGACACGAGCCACAGGACTGATTTTTTGGATGGTGGTGCTATATTCAACCTTCCTCTCTTTTGTCTCCAAGGAGTTGTACTCTTTCCTGGGGCTACTCTTCCCCTTAGGGTTACTGTTTCTCGTTTTGTGACTGCTATTGAGAGAGCTTTGAGTCAAGTTGATGTTCCTTACACCATTGCTGTGATTCGGGGTCACAGGGAAACTGGAAGTTTTATGATGAAAGCAGCAAGCATTGGGACAACCGCTGTGATTCGACAATATGGGCATCTAGAGGACGGTTCACTGAATGTGGTTACCCGTGGACAACAACGATTTCACCTAAGGCGACATTGGAATGATGTGGACGGAGTGCCTTATGGAGAGATCCAAATTATCGAAGAAGATCTACCATTGAGAACTCCAAGAGATGCATTTGGCAAATCAACATCATCAAGTAATATACTTTGTAGCCGAGTTAAAGTGCATGCCTTAAATGGGGGAAATGATTCAGAAGCAAATTTAGATGAGGGTTTTAAGAGTAAGTTTTCATCAATTGAAAGGAAAACCCACTTATCAGTCATTGGCTGCGGTTCTGCATCTGATACGATCGATGTAGCAGCAAACAGCAGTAATGTTAACTTTATGCATAAGTCAGATCAGGAAATGGGGTCCAATTTGGATTTGAGCATTGAGAATTGTTCCACTTCTGGAAAGCAGTCATCCGAAGAAGGGTTTAATAGATGCTTAAAGAATATACGATCACATAAAATTTCAAATGCTTTCTTGCCCCACTGGGTATATCGTATGTATGACCCCTATTGGCTTGCACAAAGGGCTGCAGATATGTGGAAACAAATAATTGGGGTGCCTAGTATGGATAGTCTCATCAAGAAACCTGGTGTTTTATCATTTCATATCGCCAGTAAAATACCTGTTTCTGAGTCTACAAGACAACAACTTTTGGATATCGACGGCATCGTGTATAGGTTGCGCAGGGAAATCGAATTACTAAATAGCATTGATCTTATCCGATGTAGAAGATGCCAAACTACAATTGCAAAACGAAGTAATATGTTGGTAATGTCAGATGAGGGTCCTCTTGGTGCCTATGTGAATCCTGGTGGTTATGTACATGAGATAATGACTCTTTACAAGGCCAATGGCTTATCTCTTGTTGGGCACGCAGTTACAGAATACAGCTGGTTTCCTGGATATGCATGGACAATCGCAAACTGTGCTACATGTGGAACCCAAATGGGATGGCTTTTTACAACCACCAACAAAAAACTGAAGCCGGGTTCATTTTGGGGTATTCGGAGCTGTCAAGTTGCAGAAGAAATACCCCAAAACCTTTAG 1590 0.4157 METDDEIEVEEGGIPETEELQIDQFLFEEEEDDEQFDHPLIHFSSPSSSSSSQDQPNGIVNGNSSDEFTFNTSIASLHTYLGDVEDTSHRTDFLDGGAIFNLPLFCLQGVVLFPGATLPLRVTVSRFVTAIERALSQVDVPYTIAVIRGHRETGSFMMKAASIGTTAVIRQYGHLEDGSLNVVTRGQQRFHLRRHWNDVDGVPYGEIQIIEEDLPLRTPRDAFGKSTSSSNILCSRVKVHALNGGNDSEANLDEGFKSKFSSIERKTHLSVIGCGSASDTIDVAANSSNVNFMHKSDQEMGSNLDLSIENCSTSGKQSSEEGFNRCLKNIRSHKISNAFLPHWVYRMYDPYWLAQRAADMWKQIIGVPSMDSLIKKPGVLSFHIASKIPVSESTRQQLLDIDGIVYRLRREIELLNSIDLIRCRRCQTTIAKRSNMLVMSDEGPLGAYVNPGGYVHEIMTLYKANGLSLVGHAVTEYSWFPGYAWTIANCATCGTQMGWLFTTTNKKLKPGSFWGIRSCQVAEEIPQNL* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0385 529 SUPERFAMILY PUA domain-like 101 416 IPR015947 -
Tpr7g0385 529 SMART lon_5 101 417 IPR003111 -
Tpr7g0385 529 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 421 510 IPR004910 -
Tpr7g0385 529 ProSiteProfiles Lon N-terminal domain profile. 102 417 IPR003111 -
Tpr7g0385 529 ProSiteProfiles CULT domain profile. 418 525 IPR034750 -
Tpr7g0385 529 Pfam ATP-dependent protease La (LON) substrate-binding domain 101 416 IPR003111 -
Tpr7g0385 529 Gene3D - 82 210 IPR046336 -
Tpr7g0385 529 CDD CRBN_C_like 421 517 IPR034750 -
Tpr7g0385 529 PANTHER PROTEIN CEREBLON 11 520 - -
Tpr7g0385 529 Gene3D Peptide methionine sulfoxide reductase. 414 528 - -
Tpr7g0385 529 Gene3D - 349 413 - -
Tpr7g0385 529 PANTHER CEREBLON 11 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0385 Tpr-Chr7 3207294 3211127 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0385 K11793 - gmx:100779918 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0385 7 3207294 3211127 Tpr7g0385 7 3207294 3211127 ECH