Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0363 ATGACTAAGAGACCTAAGAAATCAGATTCAAATAGAAGAGGAAAACGAAGAAAACCATCCGGTGTTTTTTCACCATTGGATGTATCTGCTAGTGTTGTGTTCCGTTTACTATGTCCGGCTACTAGAATTGGCGGTGTAATTGGTAAAGGTGGTTCAATTATATCGCAAATTCGTCATGAAACCGGTGTGAAAGTTAAGATTGAAGAGCCTGTCCCTGGGTGCGAAGAAAGGGTTATAACCTTTTTAAGTTCTGATAAAGAGAGTGAAGACGGTAGTGGTGAGCTAGGAAAGGAGGTTAATAATAATGATGAGGGTGAAGGGAAGGATGATGAGGGGAAAGGTAACGGGGATGATAATGAAGATAAAGATTCTGTTTCGGTTGAAGATTCACAGAGCGAGAAGGGGTATTCGACTGCGACTATTCTGAGGGCTGTAACACTAGTTTTTGACAGGATGGTTGAAGGAATATTAGATATAGGTGAAGCCGGTGATGAAAGTGTTAAAGGTTCTTACTTTGCTTTAAGGCTACTCATCCTTTCTAATCAAGTTGGATGCATTATGGGAAAGGGTGGTAGTGTGATAAAGAGAATGTCAGCTGAAAGTGGGGCACAGATTCGGATACTTGCTAAAGAAGAAATTCCCTCGTGTGCGTCGGATTCTGATGAGTTAGTTCAGGTCACAGGAGGAGTAGAAGTTGTCAGGAAAGCTCTTCAATTTATTTTTCAGCAGCTTTTGGAAAATACACCCCGTGATCATGAATCTCTGTCTAGCAATCTTACCGGGCCGTCATCTCATTCATATGGTCAATTCCCACCAACTAAACGCACTTTTGCTGGTCAAGGAGCATCTTTTGCTACTGGGGCTAATGAAATTCCTGTTTACCACTCTGCTCCTATGATTCCCAAATTTCATGAAGGTGCCATCCATGGTCGCATGAGGCCTTCACCTTCACCGGAAATACTCACTTTCCGTTTATTGTGTCCTTCCGAAAATGTAGGAAATTTAATTGGCAAAGGTGGATCAACTATAATGACTATGCAACAAGAGACAGCTAGTGAAATCAAGGTTATAGAACCCATTCCAGGTTCAGAGGACTGTATTATTGTCATATCTGGTCCAGCGCACCCAGATGATAGAATATCTCCCGTGCAAGAGGCTTTGTTTCGTGTACAAAATAGAATATCCAGGGCTATACCTGATGCCAAAGAGCACGGTATGTTAGCAAGGGTTATCGTTTCTTCCAATAATGTAGGTTGTCTCCTTGGGAAGGGTGGTTGCATCATAGCTGAAATGAGGCATTTATCAGGTGCCCATATTCGTATGTTGGGAAAGGATAAGGGTCCAAAGTGTGTTTCAGAAGAAGATGAAGTAATTCAGGTAAGTGGAGAAATTGAGGCAGTGCATGATGCTCTTTTGCAAATAACCGCAAGATTAAAATATCATTTCTATCGCGATGTATTTCCTTCTGGCAATTTTCCTTCAAATTCTGCATTTCTGGATCAACATTCTCCATTCCCACCTCATTTGGGAAGACGGGGACTTTCACCTCCCGGAATGTATTCTGACCGAGGTCCACATGTTGGTTTTCCCCTTGATGATCACCCTCCTTTTATGAATAATATATATAGACCAGGCATTCCTCCTCACATATCTGAAAGGAAGCCTTGGGGTCCTAAGGGGATACTTGAAGGTGGCGGACACATGGGCTTGCCAGAATTTACTGGTGGTCCCCGAAGAATTTCTGGATTTGCAGGAGGAAGCCAACCAATTATCACAAATACCACTGTTGAAGTTGTTGTTCCTCGCGCTTTGGTGCCTGTAATATACGGGGAAGATGGTGAATGCCTGAAACAAATACTCCAGATCTCTGATGCAAATGTTATTATTACCGATCCCAAACCTGGAGCTGTGGAAACTAAAATCATAATATCTGGAACCCCGGAGCAAACTAATGCTGCACAGAGTCTTATTCAGGCATTTGTCATGAGTGAGAGGGAGTTTTGTTGA 2007 0.425 MTKRPKKSDSNRRGKRRKPSGVFSPLDVSASVVFRLLCPATRIGGVIGKGGSIISQIRHETGVKVKIEEPVPGCEERVITFLSSDKESEDGSGELGKEVNNNDEGEGKDDEGKGNGDDNEDKDSVSVEDSQSEKGYSTATILRAVTLVFDRMVEGILDIGEAGDESVKGSYFALRLLILSNQVGCIMGKGGSVIKRMSAESGAQIRILAKEEIPSCASDSDELVQVTGGVEVVRKALQFIFQQLLENTPRDHESLSSNLTGPSSHSYGQFPPTKRTFAGQGASFATGANEIPVYHSAPMIPKFHEGAIHGRMRPSPSPEILTFRLLCPSENVGNLIGKGGSTIMTMQQETASEIKVIEPIPGSEDCIIVISGPAHPDDRISPVQEALFRVQNRISRAIPDAKEHGMLARVIVSSNNVGCLLGKGGCIIAEMRHLSGAHIRMLGKDKGPKCVSEEDEVIQVSGEIEAVHDALLQITARLKYHFYRDVFPSGNFPSNSAFLDQHSPFPPHLGRRGLSPPGMYSDRGPHVGFPLDDHPPFMNNIYRPGIPPHISERKPWGPKGILEGGGHMGLPEFTGGPRRISGFAGGSQPIITNTTVEVVVPRALVPVIYGEDGECLKQILQISDANVIITDPKPGAVETKIIISGTPEQTNAAQSLIQAFVMSEREFC* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0363 668 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 169 248 IPR036612 GO:0003723
Tpr7g0363 668 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 404 487 IPR036612 GO:0003723
Tpr7g0363 668 ProSiteProfiles Type-1 KH domain profile. 31 95 - -
Tpr7g0363 668 PANTHER KH DOMAIN-CONTAINING PROTEIN HEN4-LIKE 6 533 - -
Tpr7g0363 668 MobiDBLite consensus disorder prediction 1 23 - -
Tpr7g0363 668 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 593 662 IPR036612 GO:0003723
Tpr7g0363 668 CDD PCBP_like_KH 174 241 - -
Tpr7g0363 668 CDD PCBP_like_KH 322 391 - -
Tpr7g0363 668 Gene3D K Homology domain, type 1 319 397 IPR036612 GO:0003723
Tpr7g0363 668 Gene3D K Homology domain, type 1 28 90 IPR036612 GO:0003723
Tpr7g0363 668 CDD PCBP_like_KH 33 80 - -
Tpr7g0363 668 ProSiteProfiles Type-1 KH domain profile. 405 474 - -
Tpr7g0363 668 ProSiteProfiles Type-1 KH domain profile. 171 240 - -
Tpr7g0363 668 MobiDBLite consensus disorder prediction 83 129 - -
Tpr7g0363 668 CDD KH-I 595 658 - -
Tpr7g0363 668 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 25 84 IPR036612 GO:0003723
Tpr7g0363 668 SMART kh_6 592 662 IPR004087 GO:0003676
Tpr7g0363 668 SMART kh_6 170 245 IPR004087 GO:0003676
Tpr7g0363 668 SMART kh_6 404 479 IPR004087 GO:0003676
Tpr7g0363 668 SMART kh_6 319 395 IPR004087 GO:0003676
Tpr7g0363 668 SMART kh_6 30 100 IPR004087 GO:0003676
Tpr7g0363 668 Gene3D K Homology domain, type 1 591 666 IPR036612 GO:0003723
Tpr7g0363 668 CDD PCBP_like_KH 409 475 - -
Tpr7g0363 668 Pfam KH domain 34 81 IPR004088 GO:0003723
Tpr7g0363 668 Pfam KH domain 322 374 IPR004088 GO:0003723
Tpr7g0363 668 Pfam KH domain 595 658 IPR004088 GO:0003723
Tpr7g0363 668 Pfam KH domain 409 475 IPR004088 GO:0003723
Tpr7g0363 668 Pfam KH domain 175 240 IPR004088 GO:0003723
Tpr7g0363 668 MobiDBLite consensus disorder prediction 251 272 - -
Tpr7g0363 668 MobiDBLite consensus disorder prediction 1 19 - -
Tpr7g0363 668 ProSiteProfiles Type-1 KH domain profile. 320 387 - -
Tpr7g0363 668 ProSiteProfiles Type-1 KH domain profile. 593 657 - -
Tpr7g0363 668 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 319 403 IPR036612 GO:0003723
Tpr7g0363 668 Gene3D K Homology domain, type 1 168 248 IPR036612 GO:0003723
Tpr7g0363 668 Gene3D K Homology domain, type 1 404 481 IPR036612 GO:0003723
Tpr7g0363 668 MobiDBLite consensus disorder prediction 83 132 - -
Tpr7g0363 668 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 6 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0363 Tpr-Chr7 3009498 3013767 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0363 K21444 - gmx:100777433 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0363 7 3009498 3013767 Tpr7g0363 7 3009498 3013767 ECH