Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0342 ATGGGTTCTGTTATAAACGACGACGATGTTTCACCGATCCCACAGGTTCGGGCCGTAGTATCAAACGACGATGACCCGAACCAACCAGTATGGACGTTTAGAATGTGGACATTGGGGATTTTATCGGTAGTGTTGCTTTCGTACCTGAACACATTTTTCCAATACCGAACTCAACCTTTATTGGTGACGATGATATCGGTGCAAGTTGCAACGCTTCCTATTGGTCGATTCATGGAAAAGGTGCTTCCGACGAAAAAGTTTCGGATCATTGGATTTGGGGAGAGAGAGTTTTCATTGAATCCTGGTCCTTTTAACATGAAAGAGCATGCGCTTATTTCAATATTTGGTAACGCTGGTGCTGCGTTTGGGAATGGTTCTGCTTATGCTATTGGTATTATTAATATTATTCGTGTTTTTTACCATCGGAAGATTACATTTCTTGTTAGTTGGCTTCTTGTCTTGACTACGCAGGTATTGGGGTATGGATGGGCGGGGATAATGAAGAAATACGTGGTGGAGCCGGCAGAGATGTGGTGGCCAGCCACTCTAATGCAAGTCTCTCTGTTTAGGGCTTTACATGAAAAAGATGAGAATCGAATGTCAAGAGAGAAGTTCTTTTTTATTGCATTTATTTGTAGTTTTGCATGGTATGTGATTCCAGGCTACCTCTTTGCCACATTATCAATTATTTCATGGGTTTGTTGGATATTCCCAAATTCAGTAAAAGCCCAACAAATTGGATCTGGAAAGCTTGGGCTTGGTTTGGGCTCATTTTCTCTTGACTGGACCACTATTGCTGCATTCCTTGGGAATCCACTTGTTACTCCCATTTTTGCAACAATTAATATCCTTGTTGGTTACATTTTATTAATCTACATGCTTATTCCTATGTCTTATTGGGGATTAAATCTCTATAATGCCAAAACCTTCCCAATATTCTCTTCTAAGCTATTCACTGCACAAGGTGAGGAATATAATGTGACAGCTATTGTGAATGATAAATTTGAGATAGATATGGATGCATATCTTAAACAAGGTCACATCAATTTGAGTATCTTCTTTTCTGTTAGCTATGGTCTTGGCTTTGCTGCCATTATTTCCTCCCTCACTCATGTTGCCGTTTTTAATGGAAAGGAGATATATGGTCAATTTCGTTCTTCTCGAACCGGAAAAGAAGACATTCACACAAGAATGATGAAGAAGTATAAGGACATACCTAATTGGTGGTTTCATGTTACACTTTTGTCCTCATTTCTCATTGCACTTTCATTGTGTATATTCATGAAAGAACAAATACAAATGCCATGGTGGGCTCTCATCTTTGCATCAGGACTTGCACTCATTTTTACTCTCCCCGTTAGTATCATAACTGCCACTACTAATCAGACTCCGGGTTTGAATATTATCACTGAATACATAATGGGTGTGATTTCGCCTGGATTACCAATAGCCAACGTTTGCTTCAAGACTTACGGATATATGAGTATGTCTCAGGCCATTTCTTTTCTATCTGATTTCAAACTAGGTCACTACATGAAGATTCCACCAAGGTCAATGTTCATAGTTCAGATTATAGGGACTCTTATAGCTGGAACTGTGGATGTTGGTGTGGCATGGTGGTTGCTAGGTTCAATAGAGAACATATGCCACGAAGAACTACTACCACCTGGTAGTCCATGGACATGCCCAGGTGATAATGTGTTCTTCGATGCATCCGTTATATGGGGTTTGGTCGGCCCAAAAAGAATTTTTGGCCCCCTAGGAAACTACTCAACGTTGAATTGGTTCTTCTTATTTGGAGCATTAGGCCCATTAATTGTATGGGCCCTTATGAAAGCCTTTCCAAATAAAAAATGGTTATCACATATTCACCTTCCTGTTATACTTGGAGCAACTGCAGTAATGCCACCAGCTAGCACAGTGAATTTCAATTCATGGCTTATTGTTGCAATTACATTTAACTATTTTGTGTATAAATATTATAAGAAATGGTGGGAAAGGTACAATTATGTTCTTGCTGCTGGTTTAGATGCTGGATTGGCTTTCATGACTACTCTTCTATTTTTTACTGTTAGTAATGGAGGAATAAAGTTGAACTGGTGGGGTCAAGATGAGCATTGTCCTCTTGCAAATTGTCCTACTGCTAAAGGAGGAATAGCTGCTGATGGTTGTCCTGCATTTTCATAA 2187 0.396 MGSVINDDDVSPIPQVRAVVSNDDDPNQPVWTFRMWTLGILSVVLLSYLNTFFQYRTQPLLVTMISVQVATLPIGRFMEKVLPTKKFRIIGFGEREFSLNPGPFNMKEHALISIFGNAGAAFGNGSAYAIGIINIIRVFYHRKITFLVSWLLVLTTQVLGYGWAGIMKKYVVEPAEMWWPATLMQVSLFRALHEKDENRMSREKFFFIAFICSFAWYVIPGYLFATLSIISWVCWIFPNSVKAQQIGSGKLGLGLGSFSLDWTTIAAFLGNPLVTPIFATINILVGYILLIYMLIPMSYWGLNLYNAKTFPIFSSKLFTAQGEEYNVTAIVNDKFEIDMDAYLKQGHINLSIFFSVSYGLGFAAIISSLTHVAVFNGKEIYGQFRSSRTGKEDIHTRMMKKYKDIPNWWFHVTLLSSFLIALSLCIFMKEQIQMPWWALIFASGLALIFTLPVSIITATTNQTPGLNIITEYIMGVISPGLPIANVCFKTYGYMSMSQAISFLSDFKLGHYMKIPPRSMFIVQIIGTLIAGTVDVGVAWWLLGSIENICHEELLPPGSPWTCPGDNVFFDASVIWGLVGPKRIFGPLGNYSTLNWFFLFGALGPLIVWALMKAFPNKKWLSHIHLPVILGATAVMPPASTVNFNSWLIVAITFNYFVYKYYKKWWERYNYVLAAGLDAGLAFMTTLLFFTVSNGGIKLNWWGQDEHCPLANCPTAKGGIAADGCPAFS* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0342 728 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 15 691 IPR004813 GO:0035673
Tpr7g0342 728 PANTHER ISP4 LIKE PROTEIN 5 726 IPR004648 GO:0055085
Tpr7g0342 728 PANTHER OLIGOPEPTIDE TRANSPORTER 2 5 726 - -
Tpr7g0342 728 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 9 692 IPR004648 GO:0055085
Tpr7g0342 728 Pfam OPT oligopeptide transporter protein 31 690 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0342 Tpr-Chr7 2743581 2748849 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0342 6 727 Organic Solute Cotransporters AT1G09930 69.199 0.0 1076
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0342 - - gmx:100785973 1155.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0342 7 2743581 2748849 Tpr7g0342 7 2743581 2748849 ECH