Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0341 ATGGATTCAGTTATACACACCCAACATTTTTACTCATTTCACTACCACTCTCACAAACAAGCTTCTACAACAACTCGTTGCTTCAGAACTAAAAAACCTTTCATTTTTTCTTCTCATAATTTTGCAAAACTCAAATGCAATAGTTATAGTAAAAATTATGTCCCCAACGGTAAATCACAACAAAACCATAAAGGGAATTCCAATAGTATACAATCATCCCCAAACGGTGCAACAAATTTAGAGGAGATAGAGAACAATAATCAACTCCGTAAATTCGTTAAAATTGGTGAATTAGATGAGGGGTTTAAGTTTCTTGAGCGAATGAGTTTCAAAGGAGGCATTCCCGATGTATTTGTTTGCACAAATCTCATTCGTCAGTTTTGTAAAACCGGCAAAACTAAGAAAGCTACACGAGTCATGGAAATTCTAGAAACTTCCAATGTGGTTCCTGATGTTATAGCGTACAATGTTTTGATCGATGGTTATTGCAAATCGGGGGAGATAGAGAAAGCTTTGCAGCTTCTAGAACGGATGAGTGTTTCGCCTGATGTGGTCACTTATAATACGATTTTGCGTAGTTTGTGTCATAGGGGTAAATTAAAGCAAGCTATGGAAGTTCTTGACAGGCAGCTACAAAGGGGGATTTATCCCAATTTGATTACGTACAATATATTGATAGAGGCGACTTGTAAAGAGAGTGGAGTTGGTGAGTCGATGAAGTTATTGGATGTGATGAAGATTAAAGGATGTAAACCCAACGTGATTACTTTCGGTATTCTTATCAATGGGATTTGCAAGGAAGGTAGGTTGGATGAAGCGATTAAGGTTTTGAGTGACATGACATCTTATGGTTGTGAACCGGATGTGATCGTCCATAATACCATTTTGCGTAGCTTGTGTGATACTGGACGATGGAGGGATGCCGAGAGCTTACTGGCTAACATGCTTCGTAAGGGTTGTTCTCCTAGTATTGTTACTTTCAATATCTTGATTACTTTCTTGTGTCGAAAAGGTTTGCTCGGTAGGGCCATTGATATCTTGGAGAAGATGCCGAAGCACGGCTGTACTCCAAATTCATTGAGTTACAATCCATTGCTTCATGCATTTTGTCAAGAAAAAAAGATGGATAGAGCAATTGAGTATTTGGAAGTAATGGTGTCTAGGGGTTGTTACCCGGATATTGTGACCTACAATACTTTGGTTACTGCTTTATGCAAAGACGGGAAGGTGGACATTGCTGTTGAGTTGCTGAATCAGTTGAGTAGTAAAGGGTGCTCTCCTAATGCAATTACTTATAATACCGTTATTGATGGACTTTCAAAGGTAGGGGCAACTGAGCATGCTGCAGAACTTTTGGATGAGATGTGTAGGAAAGGTCCTGAACCTGATGTAATTACATATTCTTCAGTGATTGGGGGATTCATTCGTGAGAGAAAGGTTGATGGTGCTATCAAAATTTTCCGTGACTTGGAAAGATCAGGCATTAGGATCAATGCTTTCCCTTACAACTCAATCATGTTGGGACTCTGTATGGCTCGGCAAACTAGTAGTGCTATTGATCTATTGACCCATATGATAGATAAAGGATGCAAACCTACTGAAGCTACATATACCATTCTTATTAGAGGCATTGTTTATGAAGGATTAGATGAGGAGGCTCTGGAGTTGTTTAATGAGTTGTGCTCCAGAGGATTTGTGAAGAAAAGTTCTGTAGAAAAGTTACTAGTCAATATATAG 1737 0.3886 MDSVIHTQHFYSFHYHSHKQASTTTRCFRTKKPFIFSSHNFAKLKCNSYSKNYVPNGKSQQNHKGNSNSIQSSPNGATNLEEIENNNQLRKFVKIGELDEGFKFLERMSFKGGIPDVFVCTNLIRQFCKTGKTKKATRVMEILETSNVVPDVIAYNVLIDGYCKSGEIEKALQLLERMSVSPDVVTYNTILRSLCHRGKLKQAMEVLDRQLQRGIYPNLITYNILIEATCKESGVGESMKLLDVMKIKGCKPNVITFGILINGICKEGRLDEAIKVLSDMTSYGCEPDVIVHNTILRSLCDTGRWRDAESLLANMLRKGCSPSIVTFNILITFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPLLHAFCQEKKMDRAIEYLEVMVSRGCYPDIVTYNTLVTALCKDGKVDIAVELLNQLSSKGCSPNAITYNTVIDGLSKVGATEHAAELLDEMCRKGPEPDVITYSSVIGGFIRERKVDGAIKIFRDLERSGIRINAFPYNSIMLGLCMARQTSSAIDLLTHMIDKGCKPTEATYTILIRGIVYEGLDEEALELFNELCSRGFVKKSSVEKLLVNI* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0341 578 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 428 462 IPR002885 -
Tpr7g0341 578 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 183 217 IPR002885 -
Tpr7g0341 578 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 288 322 IPR002885 -
Tpr7g0341 578 SUPERFAMILY HCP-like 136 464 - -
Tpr7g0341 578 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 393 427 IPR002885 -
Tpr7g0341 578 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 358 392 IPR002885 -
Tpr7g0341 578 Pfam PPR repeat family 287 336 IPR002885 -
Tpr7g0341 578 Pfam PPR repeat family 182 231 IPR002885 -
Tpr7g0341 578 Pfam PPR repeat family 500 543 IPR002885 -
Tpr7g0341 578 Pfam PPR repeat family 392 441 IPR002885 -
Tpr7g0341 578 Pfam PPR repeat 119 145 IPR002885 -
Tpr7g0341 578 PANTHER OS02G0565400 PROTEIN 8 576 - -
Tpr7g0341 578 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 218 252 IPR002885 -
Tpr7g0341 578 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 323 357 IPR002885 -
Tpr7g0341 578 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 463 497 IPR002885 -
Tpr7g0341 578 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 533 567 IPR002885 -
Tpr7g0341 578 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 151 181 IPR002885 -
Tpr7g0341 578 Gene3D Tetratricopeptide repeat domain 283 350 IPR011990 GO:0005515
Tpr7g0341 578 Gene3D Tetratricopeptide repeat domain 422 493 IPR011990 GO:0005515
Tpr7g0341 578 Gene3D Tetratricopeptide repeat domain 351 421 IPR011990 GO:0005515
Tpr7g0341 578 Gene3D Tetratricopeptide repeat domain 494 562 IPR011990 GO:0005515
Tpr7g0341 578 Gene3D Tetratricopeptide repeat domain 212 282 IPR011990 GO:0005515
Tpr7g0341 578 PANTHER ATPASE EXPRESSION PROTEIN 3 8 576 - -
Tpr7g0341 578 TIGRFAM PPR: pentatricopeptide repeat domain 185 218 IPR002885 -
Tpr7g0341 578 TIGRFAM PPR: pentatricopeptide repeat domain 465 498 IPR002885 -
Tpr7g0341 578 TIGRFAM PPR: pentatricopeptide repeat domain 154 179 IPR002885 -
Tpr7g0341 578 TIGRFAM PPR: pentatricopeptide repeat domain 361 394 IPR002885 -
Tpr7g0341 578 TIGRFAM PPR: pentatricopeptide repeat domain 430 464 IPR002885 -
Tpr7g0341 578 TIGRFAM PPR: pentatricopeptide repeat domain 220 254 IPR002885 -
Tpr7g0341 578 TIGRFAM PPR: pentatricopeptide repeat domain 255 289 IPR002885 -
Tpr7g0341 578 TIGRFAM PPR: pentatricopeptide repeat domain 502 534 IPR002885 -
Tpr7g0341 578 TIGRFAM PPR: pentatricopeptide repeat domain 536 566 IPR002885 -
Tpr7g0341 578 TIGRFAM PPR: pentatricopeptide repeat domain 291 323 IPR002885 -
Tpr7g0341 578 TIGRFAM PPR: pentatricopeptide repeat domain 395 429 IPR002885 -
Tpr7g0341 578 TIGRFAM PPR: pentatricopeptide repeat domain 325 358 IPR002885 -
Tpr7g0341 578 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 253 287 IPR002885 -
Tpr7g0341 578 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 116 150 IPR002885 -
Tpr7g0341 578 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 498 532 IPR002885 -
Tpr7g0341 578 Pfam PPR repeat 354 386 IPR002885 -
Tpr7g0341 578 Pfam PPR repeat 147 179 IPR002885 -
Tpr7g0341 578 Pfam PPR repeat 458 489 IPR002885 -
Tpr7g0341 578 Pfam PPR repeat 248 281 IPR002885 -
Tpr7g0341 578 Gene3D Tetratricopeptide repeat domain 84 211 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0341 Tpr-Chr7 2734738 2736829 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0341 93 576 Glycosyltransferase AT1G05670 29.713 3.33e-72 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0341 - - tcc:18591847 785.793