Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0325 ATGCTTTTCACCTCTCTCGTTATCTCCACATGTAATGTAGCTTCGGGGACAATGTTTACCATAGAAAACCGTTGTAACAAAACAATCTGGCCAGGAACTCTTTCCGGCAATGGCGCTGAACTTCTTGGAGATGGGGGATTTTTACTGTCGCCTGGATCGTCTGTTCAGTTCACCGCTCCGTTAGGATGGTCAGGGCGTTTCTGGGGTAGAACTGGCTGCAACTTTGATGATGCTGGTAACAGGAATTGCATCACCGGAGACTGCACCGGGGGATTGAAATGCAATGGAGGAGGTGCTCCTCCGGTTACACTGGCGGAATTTACAATCAGAAGCGGGAATGGAGATAAAGACTTTTACGACGTCAGTTTGGTTGACGGTTACAATGTGGGGATAGGGATACAGGCAACTGGTGGAACTGGTGACTGTCAGTATGCAGGTTGTGTTGCAGACTTAAATGGTCAATGTCCGGCAGAGTTGCAAGTAACGGAGGAAGGGGGTTCTGTGGTGGCGTGTAAGAGTGCATGTGCGGCGTTTAATACAGAGGAATTTTGTTGCACCGGTGAGCATTCAAGTCCACAGAGTTGTAGTCCAACACAGTACTCAGAGATGTTTAAGATTGCTTGCCCCTCTGCATACAGTTATGCTTATGATGATGCTTCAAGCACTTGCACATGTTCTGGAGCCGATTATCATATCACTTTTTGTCCAACTGCTTCCTCTTAG 723 0.4758 MLFTSLVISTCNVASGTMFTIENRCNKTIWPGTLSGNGAELLGDGGFLLSPGSSVQFTAPLGWSGRFWGRTGCNFDDAGNRNCITGDCTGGLKCNGGGAPPVTLAEFTIRSGNGDKDFYDVSLVDGYNVGIGIQATGGTGDCQYAGCVADLNGQCPAELQVTEEGGSVVACKSACAAFNTEEFCCTGEHSSPQSCSPTQYSEMFKIACPSAYSYAYDDASSTCTCSGADYHITFCPTASS* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0325 240 PANTHER PATHOGENESIS-RELATED PROTEIN 5 13 236 - -
Tpr7g0325 240 Gene3D Thaumatin 17 236 IPR037176 -
Tpr7g0325 240 SMART tha2 19 236 IPR001938 -
Tpr7g0325 240 PIRSF PR5 1 240 IPR001938 -
Tpr7g0325 240 SUPERFAMILY Osmotin, thaumatin-like protein 18 236 IPR037176 -
Tpr7g0325 240 PRINTS Pathogenesis-related protein signature 18 30 IPR001938 -
Tpr7g0325 240 PRINTS Pathogenesis-related protein signature 66 77 IPR001938 -
Tpr7g0325 240 PRINTS Pathogenesis-related protein signature 79 108 IPR001938 -
Tpr7g0325 240 PRINTS Pathogenesis-related protein signature 117 133 IPR001938 -
Tpr7g0325 240 PRINTS Pathogenesis-related protein signature 226 235 IPR001938 -
Tpr7g0325 240 ProSiteProfiles Thaumatin family profile. 19 238 IPR001938 -
Tpr7g0325 240 Pfam Thaumatin family 23 236 IPR001938 -
Tpr7g0325 240 CDD TLP-PA 19 235 - -
Tpr7g0325 240 PANTHER OS03G0233200 PROTEIN 13 236 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0325 Tpr-Chr7 2626787 2631298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0325 14 236 Receptor kinase-like Gene Family AT5G38280 46.781 2.55e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0325 - - jre:109002520 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0325 7 2626787 2631298 Tpr7g0325 7 2626787 2631298 ECH