Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0323 ATGCTTCAAGCAATGGAAACTAATGGTGTTGGTGTTGGTGTTGGTAATGGTGGTGGTTTCTCCGCTCATTTACAAAGCTGTGGTGGTGGTGGTGGTGGTGATAGTAGTGAAGAGGAATTGTCAGTGTTACCTCGTCATACTAAGGTTGTTGTTACGGGAAATAACCGTACGAAATCGGTTCTTGTTGGTCTTCAAGGTGTTGTTAAGAAAGCCGTTGGATTAGGTGGTTGGCATTGGCTGGTTCTTACAAATGGTATTGAAGTGAAGCTACAAAGGAATGCTCTTAGTGTGCTTGAAGCTCCTACTGGCAATGAAGAAGATGATGACCTTGAATTTGATAATGTGCAATGGAATAATGGATCAGATATGGCATCTGACGATACACATAAGTCTCACAAATCGAGGCAGAGAATGCATAGATCATTGGGATCATGTCATAAGACGATGAGTAGGTCCTTCTCTGGTGATTCACAGTCTAAGGGGTCCGTTACAATGTCTCATGGGTCCACGAAGGTTGACTTGAGCAAGCTTGAAATGGCTGCATTGTGGAGATATTGGAGACATTTTAATCTTGTGGATGTTGTCCCGAATCCATCGAAAGAGCAGCTTGTAGATGTTGTTCAGAGGCATTTCATGTCCCAAATGCAATTGGATGAGTTGCAGGTCATTAAGGGATTCGTTAATGCTGCAAAGAGGCTCAAGACTGTGTGCAAATGA 717 0.431 MLQAMETNGVGVGVGNGGGFSAHLQSCGGGGGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVLEAPTGNEEDDDLEFDNVQWNNGSDMASDDTHKSHKSRQRMHRSLGSCHKTMSRSFSGDSQSKGSVTMSHGSTKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLVDVVQRHFMSQMQLDELQVIKGFVNAAKRLKTVCK* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0323 238 PANTHER SAP30 16 238 IPR024145 -
Tpr7g0323 238 MobiDBLite consensus disorder prediction 145 164 - -
Tpr7g0323 238 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 177 231 IPR025718 GO:0005515
Tpr7g0323 238 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 16 238 - -
Tpr7g0323 238 MobiDBLite consensus disorder prediction 140 164 - -
Tpr7g0323 238 Gene3D - 152 238 IPR038291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0323 Tpr-Chr7 2601678 2605080 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0323 - - gmx:100809195 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0323 7 2601678 2605080 Tpr7g0323 7 2601678 2605080 ECH