Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0293 ATGAAACACAAATTCTCTCTAGTTTTCTTAGTTCTCAATGTGATCTTACTACTCAACGTAGAAGCAGCAGATGATGAGTTTATCAAAACAAAAGGAGTGCAGCTTATGCTGAATGGTAGCCCCTATTATGCTAATGGTTTTAATGCATATTGGTTAATGTATTTTGCTTCTGATCCTTCTCAGAGAAACAAAGTCTCATCAACGTTTCAAGAGGCTACAAATCATGGACAGAACATAGCTAGAACTTGGGCTTTCAGTGATGGTGGATATAAACCACTGCAATACTCTCCTGGATCATACAATGAGGAAATGTTTCAGGGGTTGGACTTTGTACTAGCTGAAGCTAGAAAATATGGGATGAAGGTGATTTTGAGTTTGGTGAACAACTATGAGAATTTTGGAGGAAAGAAACAATATGTGGAATGGGCAAGGAGTCAAGGCCAGTCCATAAATTCTGAAGATGATTTCTTCACTAATTCTTTGGTAAAGGGTTACTATAAAAACCACATCAAGACTGTGCTTACAAGACGTAACAGCTTGAGTGGAGTTGCTTACAAAGATGACCCTACAATAATGGCTTGGGAGCTTATGAATGAGATTCGATGCCCTTCAGATCACTCGGGAAATACGGTTCAGGTTTGGATTAGTGAGATGGCATCTTACTTGAAATCCATAGATGGAAACCATTTGCTTGAAGCTGGTTTGGAAGGTTTCTACGGACAGTCAAATAGAGACTCTAATCCCAACTTCCAAGTAGGAACCGATTTCATTGCAAACAACCAAATCCCCACCATCGATTTTGCAACACTACACTCTTACCCTGATCAATGGCTTTCGAATAAAGGCTATGAAGACCAAATCTCTTTCTTACGTGGTTGGCTCAATGATCACATCCAAGATGCACAGAACATCCTTCACAAGCCACTTCTATTGGCAGAGTTTGGCATTTCCACTAAAAACTTAGGCAATAATAACTCAACACTGAGGGATCAGTTTTTCAATACTGTTTATTCAGCTATATATTCATCAGCAAGTGGCGGTGGAGCTGCTGTTGGTGGTTTATTTTGGCAACTTCTTGCAGAAGGAATGGATTCTTTCCGAGACGATTATGAGGTTATATTAGCTCAGAGCTCCTCAACAGCTACCTTGATTTCTCAAGAGTCTCAAAAACTAAGGCGAATTCGCAAGATGTACGCCAGACTCAAAAACATTGACAAATGGAACAAATCAAAGAGAAATTAG 1242 0.3953 MKHKFSLVFLVLNVILLLNVEAADDEFIKTKGVQLMLNGSPYYANGFNAYWLMYFASDPSQRNKVSSTFQEATNHGQNIARTWAFSDGGYKPLQYSPGSYNEEMFQGLDFVLAEARKYGMKVILSLVNNYENFGGKKQYVEWARSQGQSINSEDDFFTNSLVKGYYKNHIKTVLTRRNSLSGVAYKDDPTIMAWELMNEIRCPSDHSGNTVQVWISEMASYLKSIDGNHLLEAGLEGFYGQSNRDSNPNFQVGTDFIANNQIPTIDFATLHSYPDQWLSNKGYEDQISFLRGWLNDHIQDAQNILHKPLLLAEFGISTKNLGNNNSTLRDQFFNTVYSAIYSSASGGGAAVGGLFWQLLAEGMDSFRDDYEVILAQSSSTATLISQESQKLRRIRKMYARLKNIDKWNKSKRN* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0293 413 Gene3D Glycosidases 23 395 - -
Tpr7g0293 413 Pfam Cellulase (glycosyl hydrolase family 5) 45 325 IPR001547 GO:0004553|GO:0071704
Tpr7g0293 413 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 7 411 - -
Tpr7g0293 413 PANTHER - 7 411 IPR045053 GO:0004553
Tpr7g0293 413 SUPERFAMILY (Trans)glycosidases 27 382 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0293 Tpr-Chr7 2409545 2412725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0293 4 411 Glycoside Hydrolase AT5G66460 63.070 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0293 K19355 - gmx:100794126 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0293 7 2409545 2412725 Tpr7g0293 7 2409545 2412725 ECH