Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0287 ATGTCTGAACTCCTTTGCAATGATGAAAGAAGAGAGAATTCAGAAGATGATAAGTGGAAAAAAATTGGCAGTCTTAAAAAGAAAGCAATAAATGCATCAAGTAAATTAAGGCATTCTCTTACAAAGAAAAGAAGCAGCAAAAGTGGTAGTGGTAGTAGAAGCAATTCCCTCTCCATTGAAGATGTTAGACAAGTTGAGGAGCTTCAAGCAGTGGATGCATTTCGACAATCACTTATATTAGATAACTTACTTCCTCCAATACATGATGACTACCATATGTTATTGAGATTCTTGAAAGCAAGGAAGTTTGATGCTGACAAAGCAAAGCTCATGTGGGTCAACATGATCCAATGGAGGAAAGACTATGGTACAGATACAATTATAGAGGATTTTGATTATAAGGAGTTGCAAGAAGTTCAGAAGTACTATCCACATGGTTATCATGGTGTGGATAAGGAGGGAAGACCTGTTTATATTGAGAGACTAGGGAAAGTTGATCCTAATAAGCTTATGCAAGTAACTACCATGGAAAGATATTTGAGATACCATGTCCAAAGTTTTGAGAAAACATTTTCTGTCAAGTTTCCAGCTTGCTCTATAGCTGCTAAGAGACACATAGATTCAAATATAACAATTTTGGATGTTCAAGGCGTGGGTTTCAAAAATTTCACCAAGTCTGCACGAGAACTCATCACCCAGATGCAGAAGATTGATAGCGATTACTATCCTGAAACACTTTGTCAAATGTTTATCGTCAATGCTGGCCCTGGTTTTAAGCTTCTCTGGAACACAGTGAAAACATTTATTGATCCCAAAACTACTTCGAAGATCCATGTTCTTGGAAACAAGTTCCAAAGTAAATTACTTGAGATTATCGATGCGAGTGAGCTGCCAGAATTTCTAGGTGGTAGTTGCACTTGTGTAGATCATTGTGGCTGTCTGAGATCTGATAAAGGACCATGGCAAGACCCAAACATTTTAAAGATGGTTCTTAGTGGTAAAGTGCAATGTTCTAAACAAATAGTGACAGTTTCCAATGACAAGGGGAGGGTGATTGGATGTGATAAAACATCTATTCCAATGATACGAAGTGGATCATCTACTGGAGAATCAGGATCTGAAGCTGAAGATATCACCTCTCCCAAAGCATGTGGGAATTCTATGAACCCTATATTAACTCCTGTCCGAGAAGAGACAAGATCTGCGGATAAGGTCGGTCCTAGTTGCGGTTTTCCTGGGTCTGATGAGTGTGTTCCCCTGGTTGACAAGACTATAGATGTCGGATCAATGGAGAAGCAAGCAGCAGCACCAAACTCATTTGAGTCAAAAGAAAATTTGCTAATAGTAACCAGGACAGTTACAGTGGCCTTCGTGTTTGCTTTTTTTGCTTTTGTTCGTTCAATAGCATTTCGTGTAACAAAGGGAGTAAAAAGGGAGGAACTTGCTACCAGCTTCACAAAGACAAACCCATCCTCATCTTCTACCTTAACACGCCTTGGTGAACTTGAAAAAAAAGTTGAGACACTACAGAATAAACTTAATGTGATGCCACGTGAGAAAGAGGAGCTGCTAAATGCTGCAGTTTGTCGTGTGGATGCATTGGAAGCAGAGCTCATTGCTACGAAAAAGGCTTTGTACGAGGCATTAATGAGACAAGAAGAACTTTTGGCATACGTAGACTATCAACAAAAACGCAAATTCAAGCAGTGCTGCTGGTAA 1719 0.3938 MSELLCNDERRENSEDDKWKKIGSLKKKAINASSKLRHSLTKKRSSKSGSGSRSNSLSIEDVRQVEELQAVDAFRQSLILDNLLPPIHDDYHMLLRFLKARKFDADKAKLMWVNMIQWRKDYGTDTIIEDFDYKELQEVQKYYPHGYHGVDKEGRPVYIERLGKVDPNKLMQVTTMERYLRYHVQSFEKTFSVKFPACSIAAKRHIDSNITILDVQGVGFKNFTKSARELITQMQKIDSDYYPETLCQMFIVNAGPGFKLLWNTVKTFIDPKTTSKIHVLGNKFQSKLLEIIDASELPEFLGGSCTCVDHCGCLRSDKGPWQDPNILKMVLSGKVQCSKQIVTVSNDKGRVIGCDKTSIPMIRSGSSTGESGSEAEDITSPKACGNSMNPILTPVREETRSADKVGPSCGFPGSDECVPLVDKTIDVGSMEKQAAAPNSFESKENLLIVTRTVTVAFVFAFFAFVRSIAFRVTKGVKREELATSFTKTNPSSSSTLTRLGELEKKVETLQNKLNVMPREKEELLNAAVCRVDALEAELIATKKALYEALMRQEELLAYVDYQQKRKFKQCCW* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0287 572 Pfam CRAL/TRIO, N-terminal domain 92 114 IPR011074 -
Tpr7g0287 572 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 135 309 IPR001251 -
Tpr7g0287 572 Gene3D - 26 122 - -
Tpr7g0287 572 PRINTS Cellular retinaldehyde-binding protein signature 93 115 - -
Tpr7g0287 572 PRINTS Cellular retinaldehyde-binding protein signature 262 281 - -
Tpr7g0287 572 PANTHER CELLULAR RETINALDEHYDE BINDING/ALPHA-TOCOPHEROL TRANSPORT, CRAL/TRIO-RELATED 8 567 - -
Tpr7g0287 572 SMART CRAL_TRIO_N_2 90 115 IPR011074 -
Tpr7g0287 572 SUPERFAMILY CRAL/TRIO domain 134 329 IPR036865 -
Tpr7g0287 572 SMART sec14_4 135 306 IPR001251 -
Tpr7g0287 572 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 8 567 - -
Tpr7g0287 572 Pfam CRAL/TRIO domain 141 303 IPR001251 -
Tpr7g0287 572 Gene3D - 123 333 IPR036865 -
Tpr7g0287 572 SUPERFAMILY CRAL/TRIO N-terminal domain 66 131 IPR036273 -
Tpr7g0287 572 CDD SEC14 136 303 IPR001251 -
Tpr7g0287 572 MobiDBLite consensus disorder prediction 33 56 - -
Tpr7g0287 572 Coils Coil 499 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0287 Tpr-Chr7 2360057 2364262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0287 69 300 Acyl Lipid Metabolism Gene Families AT5G47730 29.675 1.97e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0287 - - gmx:100811161 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0287 7 2360057 2364262 Tpr7g0287 7 2360057 2364262 ECH