Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0282 ATGATCTCTCAGTTCTTCGTTCTTTCTCAAAGAGGCGACAACATCGTCTTTCGCGACTATCGCGGTGAAGTACAAAAAGGAAGCCCTGAGACATTTTTCCGAAAAGTCAAGTTCTGGAAAGAGGATGCTGATGGAGATGCTCCACCTGTTTTTAATGTAGATGGTGTTAACTACTTCCACGTTAAGGTTGCTGGATTGTTATTTGTTGCTACAACTAGAATCAATGTTTCCCCTTCTCTTGTTTTGGAACTTTTACAAAGAACTGCACGTGTCATCAAAGATTACCTTGGTGTTCTTAATGAAGATTCTTTTCGAAAGAATTTCGTCCTCGTTTATGAACTTCTTGATGAAGTCATTGATTTTGGTTATGCGCAAACAACATCTACTGAGGTTTTGAAGTCATATGTTTTCAATGAGCCAATTGTGATTGAGTCTGCACTTCCCCTTGGCCCCGCTTCCATTTTTATGCAAGGAACCAAACGAATGCCAGGTACAGCTATTACAAAATCTGTTGTTGCTAATGAACCTGGTGGTAGGAAGAGGGAGGAGATCTTTGTTGATGTGATTGAGAAAATAAGTGTCACATTCAATTCCAGTGGATTTATACTTACTAGTGAGATTGATGGTACCATTCAAATGAAGAGTTATCTTACCGGTAATCCAGAGATTCGACTTGCTCTCAATGAGGACCTGAGTATAGGAACAAGTGATTACAGAGGTTCTGGTGCTGTTATATTAGATGATTGCAACTTCCATGAGTCTGTACACCTTGATAGTTTCGATATTGATCGAACTTTATCTTTGGTACCTCCAGATGGTGAATTTCCTGTCATGAATTATCGTATAACTCAAGCATTTAAGCCACCCTTCCGTATTAATGCATTGATTGAAGAAACAGGACCACTCAAGGCTGAAGTGACCATTAAAGTGCGAGCTGAATTCAATTCAAGCATCAATGCTAACACTGTTCTTGTACAGATGCCACTTCCTACATTTACAGCCCGTGTTAATTTCGAGTTAGAACCTGGAGCGGTTGGACACACAACTGATTTTAAGGAAGCAAACAAAAGACTGGAATGGGGACTAAAAAAGGTTGTTGGTGGATCTGAGCATACTTTACGTGCAAAGCTGACATTTTCACAGGAGTTACATGGAAATATCATGAAAGAAGCAGGACCTCTTAGCATGACATTCACTATACCTATGTACAATTCTTCAAGGCTTCAGGTGAAGTACTTGCAAATCGCAAAGAAGTCAAAAGCTCACAATCCATATCGATGGGTTAGATATGTAACCCAAGCAAACTCATATGTTGCCCGGTTGTAA 1326 0.3982 MISQFFVLSQRGDNIVFRDYRGEVQKGSPETFFRKVKFWKEDADGDAPPVFNVDGVNYFHVKVAGLLFVATTRINVSPSLVLELLQRTARVIKDYLGVLNEDSFRKNFVLVYELLDEVIDFGYAQTTSTEVLKSYVFNEPIVIESALPLGPASIFMQGTKRMPGTAITKSVVANEPGGRKREEIFVDVIEKISVTFNSSGFILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGTSDYRGSGAVILDDCNFHESVHLDSFDIDRTLSLVPPDGEFPVMNYRITQAFKPPFRINALIEETGPLKAEVTIKVRAEFNSSINANTVLVQMPLPTFTARVNFELEPGAVGHTTDFKEANKRLEWGLKKVVGGSEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMYNSSRLQVKYLQIAKKSKAHNPYRWVRYVTQANSYVARL* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0282 441 Gene3D - 1 141 - -
Tpr7g0282 441 PANTHER AP COMPLEX SUBUNIT MU 2 441 - -
Tpr7g0282 441 Gene3D Mu homology domain, subdomain B 180 436 - -
Tpr7g0282 441 ProSiteProfiles Mu homology domain (MHD) profile. 181 440 IPR028565 -
Tpr7g0282 441 Gene3D Mu homology domain, subdomain B 288 440 - -
Tpr7g0282 441 CDD AP4_Mu_N 3 143 - -
Tpr7g0282 441 Pfam Adaptor complexes medium subunit family 180 440 IPR028565 -
Tpr7g0282 441 PIRSF AP_complex_mu 1 441 IPR001392 GO:0006886|GO:0016192|GO:0030131
Tpr7g0282 441 PRINTS Clathrin coat assembly protein signature 12 32 IPR001392 GO:0006886|GO:0016192|GO:0030131
Tpr7g0282 441 PRINTS Clathrin coat assembly protein signature 101 128 IPR001392 GO:0006886|GO:0016192|GO:0030131
Tpr7g0282 441 PRINTS Clathrin coat assembly protein signature 246 273 IPR001392 GO:0006886|GO:0016192|GO:0030131
Tpr7g0282 441 PRINTS Clathrin coat assembly protein signature 359 370 IPR001392 GO:0006886|GO:0016192|GO:0030131
Tpr7g0282 441 SUPERFAMILY SNARE-like 1 141 IPR011012 -
Tpr7g0282 441 CDD AP-4_Mu4_Cterm 176 441 - -
Tpr7g0282 441 SUPERFAMILY Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 180 440 IPR036168 -
Tpr7g0282 441 PANTHER AP-4 COMPLEX SUBUNIT MU-LIKE 2 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0282 Tpr-Chr7 2312175 2317353 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0282 K12402 - gmx:100800985 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0282 7 2312175 2317353 Tpr7g0282 7 2312175 2317353 ECH