Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0280 ATGGGATCAGTTTGTTGTGTTGCTGCAAAGGATCAAACTATTCCCAATAGAACTGGAAGTGAAAGTTTTCACAGAAACCCCGTATGTTCACCATCATTGAGTTTTCAATGGGATAGATGGAGCCGTGTCGCTAGTGAAATTGATGATCTTTCCTTTCGCACGCCTCATAGAGTTAGCAGAAGTGTCAGCATGGAGTTAAAGGGGTCGTTAAGTTCTGACAGAGGTAATTTATCAGATGTGGGAAGCACCATGGAGAATTCTGTAACACCTATGTCTCAGAAGTCCCCTATTCATGAGCAATTAGGTGCAAGTCGGATGAATCTATCTTCAGATCTATCCATGTCAAGTAATTGTTCTACAGCGGTGAAGAATCCGACAGAATCACCAGATATCGCAGAATCTTCAATACCGAATATTTCTTTCTCGATACCTTCTTCTTTCTCAACACCTATAAGTCGTAATCTTAATCATCACAATCTTCCTAGTTCAACACCATCTAGATGGGCTCATCGATCTCCAGGACACCCACTTTTGAGACAAATTTCTGATAGTCGAATCCTGAATCTGAAATCACCTGACAACTCAATTTCTGAGGGAAGGCCATCATTTGTACTGTCCACTTGCAGCAATGAAATGATAACTGGATCCCAATGTGGGTCATCTGATGGCTGGTCTATGCGCACCTTTTCTGAACTGGTGGCCTCATCTCAAAAGGAGAGGTGGTCGTTTGATAGCGAGCATTTTGGTTCAGGTCGACACAAGATAAGTGGAACTAGTAGTAGGTTCTCATATTCTCCCTCCATGGATTTACAATCTTGTGGGGCCTGTGCCAAGCTATTGACTGAGAAAACTGCATGGAGCAGCCAGAAATTTATTTCCAACAACGACCTCTCGGTTGTTGCTGTATTGGTCTGTGGTCATGCATATCATGCGGAATGCTTGGAGACCATGACATCCGAAGCAGATAGTTATGATCCAGCTTGTCCAATTTGCATGGTTGGAGAGAAGCACTTGTCAATGTTGTCCAGAAAAAGTCTTAGGGCAGAATCAGAAATGAAGGCCAAGAACTACAAGATAGCCCGAAACCGTGTAGTTGATAGCTACTTTGATGGTGGATTAGATGTTTATGATCGTCAAAAAAACATAGTTTCGAAATTGGAGGCTAGCTCCAGTTCAAGGAGTTCATTAAGAAAACCCTTCTTGAAGAGGCATTTTTCACTGGGATCAAAGTGGAATCGATCCCTGTCTGAGAATGATTCTGCCAGGAAGAAGGGTTTTTGGGCGAGATATCGGAAAGATTGA 1302 0.427 MGSVCCVAAKDQTIPNRTGSESFHRNPVCSPSLSFQWDRWSRVASEIDDLSFRTPHRVSRSVSMELKGSLSSDRGNLSDVGSTMENSVTPMSQKSPIHEQLGASRMNLSSDLSMSSNCSTAVKNPTESPDIAESSIPNISFSIPSSFSTPISRNLNHHNLPSSTPSRWAHRSPGHPLLRQISDSRILNLKSPDNSISEGRPSFVLSTCSNEMITGSQCGSSDGWSMRTFSELVASSQKERWSFDSEHFGSGRHKISGTSSRFSYSPSMDLQSCGACAKLLTEKTAWSSQKFISNNDLSVVAVLVCGHAYHAECLETMTSEADSYDPACPICMVGEKHLSMLSRKSLRAESEMKAKNYKIARNRVVDSYFDGGLDVYDRQKNIVSKLEASSSSRSSLRKPFLKRHFSLGSKWNRSLSENDSARKKGFWARYRKD* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0280 433 ProSiteProfiles Zinc finger RING-type profile. 273 331 IPR001841 -
Tpr7g0280 433 SMART ring_2 273 331 IPR001841 -
Tpr7g0280 433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 333 IPR013083 -
Tpr7g0280 433 PANTHER EXPRESSED PROTEIN 1 427 - -
Tpr7g0280 433 SUPERFAMILY RING/U-box 268 332 - -
Tpr7g0280 433 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 1 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0280 Tpr-Chr7 2289873 2293134 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0280 - - gmx:100793040 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0280 7 2289873 2293134 Tpr7g0280 7 2289873 2293134 ECH