Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0278 ATGGCGAAACATTCAGTAGTAATGGCGAAGAAAAAATGGCCATTAATGTTACTCGCTTTCTTATCCATCTCAACAGTTATGGTTCTCTTCCTGAGACCTAACAATTCATGCAACAATATTAAGAGCTTTGAACAACAACAACAACAAGATCAGATTCTCGCTTCCTCTACCTCCTCCGTCAACCCCTTAGATTTCATGAAGTCTAAGTTAGTTCTTATGGTTTCCCACGAGCTTTCTCTTTCTGGTGGACCTTTACTTTTGATGGAATTGGCGTTTCTGTTAAGAGCCGTTGGTTCTGATGTTGTTTGGGTTACTAATCAGTATCCTGCTGAACATGATCAGGTTATTTATAGTTTGGAAAGTAAAATGTTGGATAGAGGAGTTCAGGTCCTGCCTGCAAGAGGTGAAAAGGCTGTAGATACAGCTCTTAAAGCTGATCTAGTCATTCTAAATACTGCGGTAGCCGGAAAGTGGCTGGATGCCGTCTTGAAGGAAAAAGTTAACCTCGTTCTTCCTAAGGTTTTATGGTGGATTCATGAAATGAGAGGGCATTATTTCAAAGTGGAATATGTTAAGCACCTCCCTTTTGTTGCAGGTGCCATGATTGATTCACATACAACTGCACAGTACTGGAAGAATAGGACTAGAGAGCGTTTAGGAATTAAAATGCCTGAAACTTATGTTGTACATCTTGGAAATAGCAAGGAGCTTATGGATGTTGCCGAAGATAGTGTAGCAAAGAGGGTTCTTCGTGAGCATGTTCGGGAATCTCTTGGAGTAAGAAATGATGATCTACTTTTTGCCATCATAAATAGTGTTTCACGTGGTAAAGGGCAAGATCTATTTCTTCATGCCTTTCATGAAAGTTTGCAGCTCATTCAGGAGAAGAAACTCAAGTTGCCATCTTTGCATGCTATAGTTGTAGGAAGTGATATGAATGCTCAGACAAAGTTTGAAATGGAACTGCGCAAATTTGTAATAGAGAAAAAAATTCAGGACCGCGTTCACTTTGTTAACAAAACCCTGGCAGTGGCTCCTTACCTGGCTTCTATTGATGTTCTTGTTCAGAATTCTCAGGCACGGGGAGAGTGTTTTGGAAGGATAACCATAGAAGCAATGGCATTTCGCCTGCCTGTACTGGGCACTGCAGCTGGAGGCACTGTGGAGATCGTGGAGAATGGGACAACTGGTTTACTGCATCCTGTTGGCAAGGTAGGCGTAACACCTCTTGCGCGTAACATTGTGACACTGGCAACTCATGTTGAGAAGAGGCTAACTATGGGAAAGAAAGGTTCTGAGAGAGTGAAAGATAGGTTTCTCGAGCACCATATGTCCGAAAGAATTGCATTGGTTCTCAAGGATGTTTTACGGAAGGCAAGTCACAATTAA 1389 0.4183 MAKHSVVMAKKKWPLMLLAFLSISTVMVLFLRPNNSCNNIKSFEQQQQQDQILASSTSSVNPLDFMKSKLVLMVSHELSLSGGPLLLMELAFLLRAVGSDVVWVTNQYPAEHDQVIYSLESKMLDRGVQVLPARGEKAVDTALKADLVILNTAVAGKWLDAVLKEKVNLVLPKVLWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHTTAQYWKNRTRERLGIKMPETYVVHLGNSKELMDVAEDSVAKRVLREHVRESLGVRNDDLLFAIINSVSRGKGQDLFLHAFHESLQLIQEKKLKLPSLHAIVVGSDMNAQTKFEMELRKFVIEKKIQDRVHFVNKTLAVAPYLASIDVLVQNSQARGECFGRITIEAMAFRLPVLGTAAGGTVEIVENGTTGLLHPVGKVGVTPLARNIVTLATHVEKRLTMGKKGSERVKDRFLEHHMSERIALVLKDVLRKASHN* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0278 462 Gene3D Glycogen Phosphorylase B; 240 439 - -
Tpr7g0278 462 CDD GT4_PimA-like 95 453 - -
Tpr7g0278 462 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 66 457 - -
Tpr7g0278 462 Pfam Glycosyl transferases group 1 254 432 IPR001296 GO:0016757
Tpr7g0278 462 Pfam Glycosyl-transferase family 4 67 246 IPR041693 -
Tpr7g0278 462 PANTHER GLYCOSYLTRANSFERASE 1 460 - -
Tpr7g0278 462 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 1 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0278 Tpr-Chr7 2270254 2282579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0278 1 459 Glycosyltransferase AT1G19710 72.863 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0278 - - gmx:100791337 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0278 7 2270254 2282579 Tpr7g0278 7 2270254 2282579 ECH