Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0270 ATGAACTATTTCACTTTCATTTTACGATTCTTTTCTCTCTTTCTCCTTTTGTCGTCTCTTTCATTTTTGGTCTCTGCTTCTGAGTCTGACACTTCTAAACTCTTCCAAGACTGGTGCAAACAACATGGCAAAACGTATCCTTCAGAAGAAGAAAAACGTTACAGGTTCAAGGTGTTTCAAGATAACTATGCTTTTATCACACAACATAACCAAATGCAAAATTCCAGTTATACCCTCTCCCTCAACACTTTCGCAGATCTCACTCATCATGAATTCAAAACCACTCATCTTGGTCTTCAACCTTCTTCGTTGCTAAAGTTCAAATTCAACCGTTTTCAAGATCATCAATCCGATGATAATAATGATGTTCTTCAAGTTCCTTCTGAGATTGATTGGAGAAATAGTGGTGCTGTTACTTCTGTCAAAGACCAAGGAAGATGTGGTTCTTGTTGGTCATTTTCGGCAATCGGTGCTATTGAAGGGATAAATAAAATTGTGACAGGTTCTCTTGTAAGCCTTTCTGTACAAGAACTAGTAGATTGCGATACCACTTATAATAGTGGTTGTCATGGTGGATCCATGGACTATGCATACCAATTTATCATTGACAACAAAGGGATTGACACCGAGGAAGATTATCCATATTACGCTCGTCAAGTACGTTGCAAAAAGGACCAGTTAGAAAGGCGTGTTGTTACTATTGATGGTTATACTGAAATTCCTCCAAACGATGAGAAAAAACTACTAAAGGCTGTTGCAGTTCAACCTGTCAGCGTAGGCATATGCGCTGGTTCATGGGCTTTCCAATTTTACTCAGAGGGTATCTTCACTGGACCATGTTCAACTTCTATTGATCATGCAGTGTTGATTGTAGGATATGGTTCGTTAAAAGGAGAAGATTATTGGATTGTGAAGAATTCCTGGGGAACATATTGGGGAGAAAAAGGTTATGTATACATGTTACGAAACACTGATAATTCTGCAGGGTTATGTGGAATAAACACGATACCTTCATATCCAACCAAAACCAGTCCTAATCCTCCTGTCCCACCTCCGCCAGGTCCTGTATGGTGTGATGTGTTTACTTCCTGTTCACGCGGGGAAACATGTTGTTGTGCCACGGAATTTCTTGGAATATGTTTCTCTTGGAACTGCTGTGGTTTAACTTCTGCTGTCTGTTGTGAAGACAAACGTAGCTGTTGCCCACAAGAATATCCGATTTGCGACACAAGAATTGGCCAATGTCTTAAGAGAATTGCAAATGGGACGACGATAACAATGCCAACTGATAAAGAAGACACTTTCTATCAGAAAAGAGACTGGAGTTCTCATTGA 1335 0.3978 MNYFTFILRFFSLFLLLSSLSFLVSASESDTSKLFQDWCKQHGKTYPSEEEKRYRFKVFQDNYAFITQHNQMQNSSYTLSLNTFADLTHHEFKTTHLGLQPSSLLKFKFNRFQDHQSDDNNDVLQVPSEIDWRNSGAVTSVKDQGRCGSCWSFSAIGAIEGINKIVTGSLVSLSVQELVDCDTTYNSGCHGGSMDYAYQFIIDNKGIDTEEDYPYYARQVRCKKDQLERRVVTIDGYTEIPPNDEKKLLKAVAVQPVSVGICAGSWAFQFYSEGIFTGPCSTSIDHAVLIVGYGSLKGEDYWIVKNSWGTYWGEKGYVYMLRNTDNSAGLCGINTIPSYPTKTSPNPPVPPPPGPVWCDVFTSCSRGETCCCATEFLGICFSWNCCGLTSAVCCEDKRSCCPQEYPICDTRIGQCLKRIANGTTITMPTDKEDTFYQKRDWSSH* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0270 444 SMART GRAN_2 358 415 IPR000118 -
Tpr7g0270 444 CDD Peptidase_C1A 127 340 IPR039417 -
Tpr7g0270 444 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 20 375 - -
Tpr7g0270 444 SMART Inhibitor_I29_2 35 92 IPR013201 -
Tpr7g0270 444 Pfam Papain family cysteine protease 126 340 IPR000668 GO:0006508|GO:0008234
Tpr7g0270 444 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 301 320 IPR025661 -
Tpr7g0270 444 Pfam Granulin 369 416 IPR000118 -
Tpr7g0270 444 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 284 294 IPR025660 -
Tpr7g0270 444 SUPERFAMILY Cysteine proteinases 32 341 IPR038765 -
Tpr7g0270 444 Pfam Cathepsin propeptide inhibitor domain (I29) 35 92 IPR013201 -
Tpr7g0270 444 Gene3D Granulin 355 419 IPR037277 -
Tpr7g0270 444 SUPERFAMILY Granulin repeat 355 388 - -
Tpr7g0270 444 SMART pept_c1 126 341 IPR000668 GO:0006508|GO:0008234
Tpr7g0270 444 PRINTS Papain cysteine protease (C1) family signature 144 159 IPR000668 GO:0006508|GO:0008234
Tpr7g0270 444 PRINTS Papain cysteine protease (C1) family signature 286 296 IPR000668 GO:0006508|GO:0008234
Tpr7g0270 444 PRINTS Papain cysteine protease (C1) family signature 301 307 IPR000668 GO:0006508|GO:0008234
Tpr7g0270 444 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 144 155 IPR000169 -
Tpr7g0270 444 PANTHER OS05G0508300 PROTEIN 20 375 - -
Tpr7g0270 444 Gene3D Cysteine proteinases 21 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0270 Tpr-Chr7 2218435 2221555 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0270 - - mtr:MTR_3g112430 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0270 7 2218435 2221555 Tpr7g0270 7 2218435 2221555 ECH