Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0265 ATGGAAGAAGAAAAGAGTTACGGTGGAAGTAGTAGCGGTTCAAATTTGGAGACATCAAAGGCAGAGAGATCTGTGTGGCTTATGAAGTGTCCTGTTGCTGTTGCTAAATCATGGCAGAATCATCCTCCATCTCAACCTCTTTCTAAAGTTGTTTTTTCCATTGATCCTCTTCTTCCTGAACACGATCCTGCTCATCTACAGTTTACAATGGAGATGTCTGGCACTGAATCTCTGAATATGCCAAAAACTTATTCTTTGAATATGTTTAAAGACTTCGTTCCTATGTGCATCTTCTCTGAGACTAACGAAGGTGACAAGGTTGCATTGGAGGGGAAAGTAGAGCATAAGTTTGACATGAAGCCACGTCATGAAAACATTGAAGATTATGGAAAATTGTGCCGAGAGCGGACAAAGAAATCTCAGATTAAAAATCGACAAGTGCAGGTTATTACCGATGATGGTGGAGCGCACATGAGGCCAATGCCTGGAATGATTGGCTTAGTTTCATCCAATTTTAAGGATAAGAAGAAGACACAGCCAGTCAAACAAACTGATACAAAGAGAACTAGAAGAGACCGTGGAGAGCTGGAGGATATAATGTTCAAGCTATTTGAAAAACAGCCTAACTGGGCCTTGAAGCAACTTGTCCAAGAGACCGATCAACCTGCGCAATTCTTGAAAGAGATCCTGAATGAACTGTGTATATACAATAAACGAGGTGCCAATCAAGGAACTTACGAGCTGAAGCCAGAATACAAGAAATCTGTTGAAGACACGGGCGCTGAATAA 789 0.4132 MEEEKSYGGSSSGSNLETSKAERSVWLMKCPVAVAKSWQNHPPSQPLSKVVFSIDPLLPEHDPAHLQFTMEMSGTESLNMPKTYSLNMFKDFVPMCIFSETNEGDKVALEGKVEHKFDMKPRHENIEDYGKLCRERTKKSQIKNRQVQVITDDGGAHMRPMPGMIGLVSSNFKDKKKTQPVKQTDTKRTRRDRGELEDIMFKLFEKQPNWALKQLVQETDQPAQFLKEILNELCIYNKRGANQGTYELKPEYKKSVEDTGAE* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0265 262 SUPERFAMILY Rap30/74 interaction domains 14 121 IPR011039 GO:0006367
Tpr7g0265 262 PANTHER TRANSCRIPTION INITIATION FACTOR IIF, BETA SUBUNIT 9 259 - -
Tpr7g0265 262 CDD TFIIF_beta 15 121 - -
Tpr7g0265 262 Pfam TFIIF, beta subunit N-terminus 22 137 IPR040504 -
Tpr7g0265 262 PANTHER GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2 9 259 IPR003196 GO:0005674|GO:0006366|GO:0006367
Tpr7g0265 262 Gene3D - 188 255 IPR036388 -
Tpr7g0265 262 SUPERFAMILY "Winged helix" DNA-binding domain 188 254 IPR036390 -
Tpr7g0265 262 Pfam TFIIF, beta subunit HTH domain 190 253 IPR040450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0265 Tpr-Chr7 2182464 2185536 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0265 K03139 - gmx:100788473 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0265 7 2182464 2185536 Tpr7g0265 7 2182464 2185536 ECH