Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0253 ATGAGCAAGAGACCACCACCTGATCCTGTGGCAGTGCTACGAGGTCATCGCGCTTCCGTCACCGATATTTCTTTTCATCCCTTTAAACCTATATTGTTCTCCGGTTCTGCTGATGGTGAACTGCGAATTTGGGATACCTTTCGTCGTCAAACAGTTTCATCAGCATGGTTACATAGTGCTGCACATGGGATTGTTGCTCTTGCCAGTAGTTCTTCTCTTGGGACTAATAAATTTGTCAGCCAGGGTAGGGATGGAACTCTCAAAGTTTGGGATTTTGATGATTCTGGTTTGTCTAGAATTCCATCACTTACAATCAAGACAAACACTTACCACTTTTGTAAGTTTTCCATGGCTAAGAATCAGAGTACTGGGTTAAAAGAAGGGGAACCATCAAAAAATTGCATTGAAACAGAAGAGGCTCATACTAATCAAAGTTGTTCTGAAAGCTCTGAAGGGCTACCGTATGTGGCTTTGTCGGGAGAGAACTCTTCTGAGGTTGAAATTTGGGATCTCAAATCAGCTGAAAGATTTGTACGACTCCCTTCAAACATTGGTCATAACTCTTCAAGTGTTAGCAGCAAAGGGATGTGCATGGCACTTCAATTGTTTGTACCATCTGAATCACAAGGATTTTTAAATGTCTTGGCTGGATATGAAGATGGTTCCATGCTGTGGTGGGATATACGGAATCCCGGCGCTCCAATAAGTTCTGTGAAATTCCATTCTGAGCCAGTTCTGAGCGTCTGTATTGACGAGTCTTGCAAAGGAGGTGTCTTGGGAGCTGCAGATGAGAGGATTGTGATATACAGCTTGGATCATTCTTCGGGTACATGTGTGGTCAATAAAGAAATCACATTGGAGCGACCTGGCATCTCAGGCACCTCAATTCGGCCTGATGGCAAAATTGCTGCAACTGCTGGCTGGGATCACAGAGTAAGGATCTATAACTACCGCAAAGGAAATGCTTTAGCTGTACTCAAGTATCATCATGCCACGTGCAACGCTGTAACTTTTTCGTCTGATTGTAAACTTATGGCCTCTGCATCGGCAGACACAACTGTGGCGTTATGGGAATTGTATCCTCCTCGAACATGA 1095 0.4393 MSKRPPPDPVAVLRGHRASVTDISFHPFKPILFSGSADGELRIWDTFRRQTVSSAWLHSAAHGIVALASSSSLGTNKFVSQGRDGTLKVWDFDDSGLSRIPSLTIKTNTYHFCKFSMAKNQSTGLKEGEPSKNCIETEEAHTNQSCSESSEGLPYVALSGENSSEVEIWDLKSAERFVRLPSNIGHNSSSVSSKGMCMALQLFVPSESQGFLNVLAGYEDGSMLWWDIRNPGAPISSVKFHSEPVLSVCIDESCKGGVLGAADERIVIYSLDHSSGTCVVNKEITLERPGISGTSIRPDGKIAATAGWDHRVRIYNYRKGNALAVLKYHHATCNAVTFSSDCKLMASASADTTVALWELYPPRT* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0253 364 PANTHER - 3 364 - -
Tpr7g0253 364 ProSiteProfiles Trp-Asp (WD) repeats profile. 326 364 IPR001680 GO:0005515
Tpr7g0253 364 SMART WD40_4 277 316 IPR001680 GO:0005515
Tpr7g0253 364 SMART WD40_4 231 270 IPR001680 GO:0005515
Tpr7g0253 364 SMART WD40_4 131 170 IPR001680 GO:0005515
Tpr7g0253 364 SMART WD40_4 50 91 IPR001680 GO:0005515
Tpr7g0253 364 SMART WD40_4 319 358 IPR001680 GO:0005515
Tpr7g0253 364 SMART WD40_4 6 45 IPR001680 GO:0005515
Tpr7g0253 364 ProSiteProfiles Trp-Asp (WD) repeats profile. 13 54 IPR001680 GO:0005515
Tpr7g0253 364 ProSitePatterns Trp-Asp (WD) repeats signature. 345 359 IPR019775 -
Tpr7g0253 364 Pfam WD domain, G-beta repeat 295 316 IPR001680 GO:0005515
Tpr7g0253 364 Pfam WD domain, G-beta repeat 9 45 IPR001680 GO:0005515
Tpr7g0253 364 Pfam WD domain, G-beta repeat 323 357 IPR001680 GO:0005515
Tpr7g0253 364 Gene3D - 6 201 IPR015943 GO:0005515
Tpr7g0253 364 PRINTS G protein beta WD-40 repeat signature 32 46 IPR020472 -
Tpr7g0253 364 PRINTS G protein beta WD-40 repeat signature 78 92 IPR020472 -
Tpr7g0253 364 PRINTS G protein beta WD-40 repeat signature 345 359 IPR020472 -
Tpr7g0253 364 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 13 45 - -
Tpr7g0253 364 SUPERFAMILY WD40 repeat-like 4 358 IPR036322 GO:0005515
Tpr7g0253 364 Gene3D - 202 363 IPR015943 GO:0005515
Tpr7g0253 364 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 326 364 - -
Tpr7g0253 364 PANTHER TRANSDUCIN BETA-LIKE 3 3 364 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0253 10 92 Miscellaneous Gene Families AT5G08390 31.325 9.03e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0253 K24770 - gmx:100800482 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0253 7 2067328 2074841 Tpr7g0253 7 2067328 2074841 ECH