Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0251 ATGTCTGCATCCGAAGCTGAGAAGAAGGTCGAGCAAGAAAACGAAGTTCCCAAAGGGGGTGAACTCTTGTTCTGTGGTGCCACGTGTTGGGATATCGTTGGTCGTCGCAAAGGTCCCGCCGAGGGTAACTTGGTCTCTCCTTCTCGCCTCCGTCCTCTCGTTGGCATTGATATTCGTTACGTTGCCTCTGGTTGCGCGTCTTGTCATTGCGTAGCATTGGACGTTGAAGGGCGTTGCTATACATGGGGACGTAATGAGAAAGGGCAACTGGGTCATGGAGATACCATTCAGCGTGATAGGCCGACTGTGGTGTCTGAACTATCAAAATACAAAATTGTTCAAGCTGGAGCTGGGAGGAGCCATACGGTAGTTGTTACGGATGATGGAAATTCCCTAGCATTTGGATGGAACAAACATGGACAGCTAGGTTCCGGTTCTGCAAAAACTGAAATTGAACCATCTCCTGTTCGCTGTGTCGTATCTGAAGTTAAATATGCTACATGTGGTGGTGACTTTACTGTGTGGTTATCTTCAGTCGACGGAGCTTCTATACAGACTGCTGGTCTTCCACAGTATGGACAACTCGGGCATGGAACAGATAACGAGTATAATTCCAAAGACAGTTCTGTAAAATTAGTTTATGAAGCACAGCCACGTCCTCGAGCAATAGCTTCCCTTGCTGGCGAAACCATTGTCAAGGTGGCATGTGGAACAAATCACACAGTGGCGGTGGATAAGAATGGCTTTGTCTACACGTGGGGTTATGGTGGTTATGGAAGGCTAGGACATAGGGAGCAGAAGGATGAATTTGCTCCTCGCCGTGTTGACATTTTTACGAATAGAAATGTTTTGCCTCCTGATGCAATTATCTCAGCTGGTTCTATGAATTCTGCATGTACTGCAGCTGGAGGGCAATTGTACATGTGGGGCAAAATAAAGAACACTGGTGATGACTGGATGTACCCTAAGCCTCTAATGGATTTAAGCGGTTGGAATATACGATGCATGGATTCAGGGGGTATGCACCATTTTGTTGGGGCTGATTCCTCATGCATAAGTTGGGGTCATGCTCAGAATGGAGAGCTGGGATACGGACCTACTGGACAGAAGTCTTCAGCTGTACCAAAAAAGGTGGATATACTTGAGGGTATGCGTGTATTGAGTGTTGCTTGTGGTTTGGGTCATTCCATGGTTGTCGTCGACAGAGCAAATGTTGCTGATAGACTCGACCAGCTTGATACACATGATGGCAAAGCTGCTGGTGAAGGTAATGAGCCCGTGAACAAAACTTCAGTGCCTAAGAAGGCTGCTCCAAAAAAGGGTGCAAAGAAAGCTGACAGCTCAAAGAAGAGGAAAAAAGCAAAAGATTCATCTGACTCCGAAGAAGACCAAGAGGCTGAAGAAAGTGATAACAGTGATGATGAAGTTAACGGTGAGGCTGATGTTAAAACATCACGCGGTGGAAAAAATTCTGGCCGAGGGCGCGGTCGTGGTCGCGCTCCTGCAAATAAAAGCAGTTCTAAATCTTCTCCAGTGAAGCCAACCGGTAAGAGAGGAAGACCCAGAAAGTCATAA 1575 0.4686 MSASEAEKKVEQENEVPKGGELLFCGATCWDIVGRRKGPAEGNLVSPSRLRPLVGIDIRYVASGCASCHCVALDVEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYKIVQAGAGRSHTVVVTDDGNSLAFGWNKHGQLGSGSAKTEIEPSPVRCVVSEVKYATCGGDFTVWLSSVDGASIQTAGLPQYGQLGHGTDNEYNSKDSSVKLVYEAQPRPRAIASLAGETIVKVACGTNHTVAVDKNGFVYTWGYGGYGRLGHREQKDEFAPRRVDIFTNRNVLPPDAIISAGSMNSACTAAGGQLYMWGKIKNTGDDWMYPKPLMDLSGWNIRCMDSGGMHHFVGADSSCISWGHAQNGELGYGPTGQKSSAVPKKVDILEGMRVLSVACGLGHSMVVVDRANVADRLDQLDTHDGKAAGEGNEPVNKTSVPKKAAPKKGAKKADSSKKRKKAKDSSDSEEDQEAEESDNSDDEVNGEADVKTSRGGKNSGRGRGRGRAPANKSSSKSSPVKPTGKRGRPRKS* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0251 524 PANTHER PROTEIN RCC2 4 523 IPR028641 -
Tpr7g0251 524 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 115 125 IPR000408 -
Tpr7g0251 524 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 349 402 IPR000408 -
Tpr7g0251 524 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 129 179 IPR000408 -
Tpr7g0251 524 Gene3D - 209 406 IPR009091 -
Tpr7g0251 524 Gene3D - 16 208 IPR009091 -
Tpr7g0251 524 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 77 128 IPR000408 -
Tpr7g0251 524 MobiDBLite consensus disorder prediction 415 524 - -
Tpr7g0251 524 Pfam Regulator of chromosome condensation (RCC1) repeat 247 299 IPR000408 -
Tpr7g0251 524 Pfam Regulator of chromosome condensation (RCC1) repeat 188 244 IPR000408 -
Tpr7g0251 524 Pfam Regulator of chromosome condensation (RCC1) repeat 353 399 IPR000408 -
Tpr7g0251 524 Pfam Regulator of chromosome condensation (RCC1) repeat 76 125 IPR000408 -
Tpr7g0251 524 Pfam Regulator of chromosome condensation (RCC1) repeat 128 174 IPR000408 -
Tpr7g0251 524 MobiDBLite consensus disorder prediction 461 475 - -
Tpr7g0251 524 SUPERFAMILY RCC1/BLIP-II 18 402 IPR009091 -
Tpr7g0251 524 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 389 399 IPR000408 -
Tpr7g0251 524 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 248 303 IPR000408 -
Tpr7g0251 524 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 234 244 IPR000408 -
Tpr7g0251 524 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 182 247 IPR000408 -
Tpr7g0251 524 PRINTS Chromosome condensation regulator RCC1 signature 78 94 IPR000408 -
Tpr7g0251 524 PRINTS Chromosome condensation regulator RCC1 signature 112 125 IPR000408 -
Tpr7g0251 524 PRINTS Chromosome condensation regulator RCC1 signature 131 147 IPR000408 -
Tpr7g0251 524 PRINTS Chromosome condensation regulator RCC1 signature 234 250 IPR000408 -
Tpr7g0251 524 PRINTS Chromosome condensation regulator RCC1 signature 250 264 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0251 Tpr-Chr7 2044112 2051450 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0251 - - gmx:100802977 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0251 7 2044112 2051450 Tpr7g0251 7 2044112 2051450 ECH